RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 HTRA1Q92743 480 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 IL20RAQ9UHF4 553 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 HEATR1Q9H583 2144 aaKnown RBP23.26■■□□□ 1.31
VEGFA-231ENST00000640499 IGHV1-18A0A0C4DH31 117 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 HS3ST1O14792 307 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 IGLV1-44P01699 117 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 CD14P08571 375 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 PTAFRP25105 342 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 ACVR1BP36896 505 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 ERFP50548 548 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 CLRN1P58418 232 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 UBE2NP61088 152 aaKnown RBP23.26■■□□□ 1.31
VEGFA-231ENST00000640499 FMODQ06828 376 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 OR2T5Q6IEZ7 315 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 TMEM108Q6UXF1 575 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 MYPOPQ86VE0 399 aaPredicted RBP23.26■■□□□ 1.31
VEGFA-231ENST00000640499 OR9Q2Q8NGE9 314 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 OR2T29Q8NH02 315 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 FGFBP3Q8TAT2 258 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 POP5Q969H6 163 aaKnown RBP23.26■■□□□ 1.31
VEGFA-231ENST00000640499 SLCO4A1Q96BD0 722 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 Q96M85 177 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 ZNF75AQ96N20 296 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 GPX7Q96SL4 187 aaPredicted RBP23.26■■□□□ 1.31
VEGFA-231ENST00000640499 TRIM15Q9C019 465 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 LRMDAQ9H2I8 198 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 NRIP3Q9NQ35 241 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 TMEM38BQ9NVV0 291 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 ITGB1BP2Q9UKP3 347 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 AURKCQ9UQB9 309 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 UGT2A1Q9Y4X1 527 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 DSCAMO60469 2012 aa23.26■■□□□ 1.31
VEGFA-231ENST00000640499 DHRS12A0PJE2 317 aa23.25■■□□□ 1.31
VEGFA-231ENST00000640499 OR10H3O60404 316 aa23.25■■□□□ 1.31
VEGFA-231ENST00000640499 SLC2A10O95528 541 aa23.25■■□□□ 1.31
VEGFA-231ENST00000640499 HLA-HP01893 362 aa23.25■■□□□ 1.31
VEGFA-231ENST00000640499 FPR3P25089 353 aa23.25■■□□□ 1.31
VEGFA-231ENST00000640499 HOXC12P31275 282 aa23.25■■□□□ 1.31
VEGFA-231ENST00000640499 FLOT2Q14254 428 aa23.25■■□□□ 1.31
VEGFA-231ENST00000640499 ZNF672Q499Z4 452 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-231ENST00000640499 SLC25A47Q6Q0C1 308 aa23.25■■□□□ 1.31
VEGFA-231ENST00000640499 KLHL17Q6TDP4 642 aa23.25■■□□□ 1.31
VEGFA-231ENST00000640499 SKA3Q8IX90 412 aa23.25■■□□□ 1.31
VEGFA-231ENST00000640499 ARIH2OSQ8N7S6 290 aa23.25■■□□□ 1.31
VEGFA-231ENST00000640499 MBD6Q96DN6 1003 aa23.25■■□□□ 1.31
VEGFA-231ENST00000640499 TMCC3Q9ULS5 477 aa23.25■■□□□ 1.31
VEGFA-231ENST00000640499 MAGED1Q9Y5V3 778 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-231ENST00000640499 NDUFB2O95178 105 aa23.24■■□□□ 1.31
VEGFA-231ENST00000640499 IGKV3-15P01624 115 aa23.24■■□□□ 1.31
VEGFA-231ENST00000640499 CELA3BP08861 270 aa23.24■■□□□ 1.31
VEGFA-231ENST00000640499 RPL4P36578 427 aaKnown RBP23.24■■□□□ 1.31
VEGFA-231ENST00000640499 RASSF2P50749 326 aa23.24■■□□□ 1.31
VEGFA-231ENST00000640499 C10orf128Q5T292 105 aa23.24■■□□□ 1.31
VEGFA-231ENST00000640499 B3GLCTQ6Y288 498 aa23.24■■□□□ 1.31
VEGFA-231ENST00000640499 ASRGL1Q7L266 308 aa23.24■■□□□ 1.31
VEGFA-231ENST00000640499 ZNF611Q8N823 705 aa23.24■■□□□ 1.31
VEGFA-231ENST00000640499 FAM169BQ8N8A8 192 aa23.24■■□□□ 1.31
VEGFA-231ENST00000640499 STAMBPO95630 424 aa23.23■■□□□ 1.31
VEGFA-231ENST00000640499 GASTP01350 101 aa23.23■■□□□ 1.31
VEGFA-231ENST00000640499 CBR1P16152 277 aa23.23■■□□□ 1.31
VEGFA-231ENST00000640499 DNASE1P24855 282 aa23.23■■□□□ 1.31
VEGFA-231ENST00000640499 KEAP1Q14145 624 aa23.23■■□□□ 1.31
VEGFA-231ENST00000640499 MESTQ5EB52 335 aa23.23■■□□□ 1.31
VEGFA-231ENST00000640499 HDDC2Q7Z4H3 204 aa23.23■■□□□ 1.31
VEGFA-231ENST00000640499 MDP1Q86V88 176 aa23.23■■□□□ 1.31
VEGFA-231ENST00000640499 SPATA24Q86W54 205 aa23.23■■□□□ 1.31
VEGFA-231ENST00000640499 PAPD5Q8NDF8 572 aaKnown RBP23.23■■□□□ 1.31
VEGFA-231ENST00000640499 GNPDA2Q8TDQ7 276 aa23.23■■□□□ 1.31
VEGFA-231ENST00000640499 SLC38A2Q96QD8 506 aa23.23■■□□□ 1.31
VEGFA-231ENST00000640499 ALG12Q9BV10 488 aa23.23■■□□□ 1.31
VEGFA-231ENST00000640499 KRCC1Q9NPI7 259 aaPredicted RBP23.23■■□□□ 1.31
VEGFA-231ENST00000640499 STX18Q9P2W9 335 aaKnown RBP23.23■■□□□ 1.31
VEGFA-231ENST00000640499 U3KQV3 271 aa23.23■■□□□ 1.31
VEGFA-231ENST00000640499 PLCE1Q9P212 2302 aa23.23■■□□□ 1.31
VEGFA-231ENST00000640499 IMPA2O14732 288 aa23.22■■□□□ 1.31
VEGFA-231ENST00000640499 CECR9P0C854 216 aa23.22■■□□□ 1.31
VEGFA-231ENST00000640499 PATE4P0C8F1 98 aa23.22■■□□□ 1.31
VEGFA-231ENST00000640499 TSPAN31Q12999 210 aa23.22■■□□□ 1.31
VEGFA-231ENST00000640499 PGGHGQ32M88 737 aa23.22■■□□□ 1.31
VEGFA-231ENST00000640499 RFX4Q33E94 735 aa23.22■■□□□ 1.31
VEGFA-231ENST00000640499 SMARCD3Q6STE5 483 aa23.22■■□□□ 1.31
VEGFA-231ENST00000640499 C20orf204Q6ZNR8 217 aa23.22■■□□□ 1.31
VEGFA-231ENST00000640499 TMEM179BQ7Z7N9 219 aa23.22■■□□□ 1.31
VEGFA-231ENST00000640499 PIAS4Q8N2W9 510 aaPredicted RBP23.22■■□□□ 1.31
VEGFA-231ENST00000640499 SLC22A24Q8N4F4 322 aa23.22■■□□□ 1.31
VEGFA-231ENST00000640499 RASD2Q96D21 266 aa23.22■■□□□ 1.31
VEGFA-231ENST00000640499 SH3GL3Q99963 347 aa23.22■■□□□ 1.31
VEGFA-231ENST00000640499 PRRC2AP48634 2157 aaKnown RBP23.21■■□□□ 1.31
VEGFA-231ENST00000640499 E7EQL1 145 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 H7C1C5 153 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 ARHGEF9O43307 516 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 DANCRP0C864 163 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 CDAP32320 146 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 LCN6P62502 163 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 CBX1P83916 185 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 PIGFQ07326 219 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 C3orf36Q3SXR2 165 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 FAM205BPQ63HN1 556 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 DPY19L2P2Q6ZN68 376 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 CCDC36Q8IYA8 594 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms