RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 OR4Q3Q8NH05 313 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 HTRA1Q92743 480 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 NMD3Q96D46 503 aaKnown RBP11.59□□□□□ -0.55
GTF3A-209ENST00000640289 MED18Q9BUE0 208 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 NELFAQ9H3P2 528 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 STX18Q9P2W9 335 aaKnown RBP11.59□□□□□ -0.55
GTF3A-209ENST00000640289 HCFC1P51610 2035 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 A0A096LPE4 126 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 A0A1W2PPZ6 126 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 ZNF99A8MXY4 864 aaPredicted RBP11.58□□□□□ -0.56
GTF3A-209ENST00000640289 CENPBD1B2RD01 187 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 XKRYO14609 159 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 ARPC3O15145 178 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 DHHO43323 396 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 OSMP13725 252 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 APEHP13798 732 aaKnown RBP11.58□□□□□ -0.56
GTF3A-209ENST00000640289 B4GALT1P15291 398 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 HIST1H1CP16403 213 aaKnown RBP11.58□□□□□ -0.56
GTF3A-209ENST00000640289 NOS3P29474 1203 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 PEX19P40855 299 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 CDKN2AP42771 156 aaKnown RBP11.58□□□□□ -0.56
GTF3A-209ENST00000640289 TAB1Q15750 504 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 KDM4DQ6B0I6 523 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 ZNF787Q6DD87 383 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 OR4K13Q8NH42 304 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 TEX47Q8TBZ9 253 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 NSMAFQ92636 917 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 BCL2L2Q92843 193 aaPredicted RBP11.58□□□□□ -0.56
GTF3A-209ENST00000640289 MUS81Q96NY9 551 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 NMNAT3Q96T66 252 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 CIB1Q99828 191 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 ALG12Q9BV10 488 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 OR10A4Q9H209 315 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 PAPOLBQ9NRJ5 636 aaKnown RBP11.58□□□□□ -0.56
GTF3A-209ENST00000640289 KRT84Q9NSB2 600 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 NDRG3Q9UGV2 375 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 POFUT2Q9Y2G5 429 aa11.58□□□□□ -0.56
GTF3A-209ENST00000640289 SLC22A23A1A5C7 686 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 PRSS37A4D1T9 235 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 OR5H1A6NKK0 313 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 PPP3CBP16298 524 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 PPP2R2BQ00005 443 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 TGFBR3Q03167 851 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.57□□□□□ -0.56
GTF3A-209ENST00000640289 RCN1Q15293 331 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 ETFDHQ16134 617 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 TBRG1Q3YBR2 411 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 C10orf128Q5T292 105 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 OR7E24Q6IFN5 339 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 LEG1Q6P5S2 330 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 SLC25A47Q6Q0C1 308 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 KLHL24Q6TFL4 600 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 JAZF1Q86VZ6 243 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 WFDC8Q8IUA0 241 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 LNX2Q8N448 690 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 WDR31Q8NA23 367 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 C1orf162Q8NEQ5 155 aaPredicted RBP11.57□□□□□ -0.56
GTF3A-209ENST00000640289 SDR9C7Q8NEX9 313 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 OR2T33Q8NG76 320 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 OR52N5Q8NH56 324 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 RBP7Q96R05 134 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 FOXB1Q99853 325 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 OSBPL10Q9BXB5 764 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 SYT4Q9H2B2 425 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 SLC17A5Q9NRA2 495 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 VSX1Q9NZR4 365 aaPredicted RBP11.57□□□□□ -0.56
GTF3A-209ENST00000640289 TMEFF2Q9UIK5 374 aaPredicted RBP11.57□□□□□ -0.56
GTF3A-209ENST00000640289 FREM1Q5H8C1 2179 aa11.57□□□□□ -0.56
GTF3A-209ENST00000640289 CACNA1CQ13936 2221 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 EI24O14681 340 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 IDH3BO43837 385 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 EPXP11678 715 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 ANPEPP15144 967 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 CTLA4P16410 223 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 IGFBP5P24593 272 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 CDAP32320 146 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 ZNF133P52736 654 aaPredicted RBP11.56□□□□□ -0.56
GTF3A-209ENST00000640289 CRISP1P54107 249 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 SH3BGRP55822 239 aaPredicted RBP11.56□□□□□ -0.56
GTF3A-209ENST00000640289 TUBA1BP68363 451 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 TUBA4AP68366 448 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 GINS1Q14691 196 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 PPA1Q15181 289 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 PGGHGQ32M88 737 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 TIMM23BQ5SRD1 257 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 ZNF362Q5T0B9 420 aaPredicted RBP11.56□□□□□ -0.56
GTF3A-209ENST00000640289 THEM4Q5T1C6 240 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 TMEM236Q5W0B7 351 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 ACSM5Q6NUN0 579 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 ANKRD16Q6P6B7 361 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 SEZ6L2Q6UXD5 910 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 ZNF813Q6ZN06 617 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 TUBA1AQ71U36 451 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 ADCK1Q86TW2 530 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 OR52E2Q8NGJ4 325 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 FAM222BQ8WU58 562 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 DNAJC9Q8WXX5 260 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 HSD17B8Q92506 261 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 BOD1Q96IK1 185 aa11.56□□□□□ -0.56
GTF3A-209ENST00000640289 DACH2Q96NX9 599 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms