RNA–Protein interactions for RNA: ENST00000639247.1

CNTNAP2-225, Transcript of contactin associated protein like 2, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP2, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-225ENST00000639247 MEMO1Q9Y316 297 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 RTTNQ86VV8 2226 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 ZNF724A8MTY0 619 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 LRRTM2O43300 516 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 WBP4O75554 376 aaKnown RBP12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 SMNDC1O75940 238 aaKnown RBP eCLIP12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 APOL3O95236 402 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 IL2RAP01589 272 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 APEHP13798 732 aaKnown RBP12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 BMP5P22003 454 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 CLRN1P58418 232 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 PDK3Q15120 406 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 CDSNQ15517 529 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 GPR139Q6DWJ6 353 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 SLC38A2Q96QD8 506 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 DMRTA2Q96SC8 542 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 ANKRD60Q9BZ19 345 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 EMC3Q9P0I2 261 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 RAB26Q9ULW5 256 aa12.84□□□□□ -0.35
CNTNAP2-225ENST00000639247 GPR171O14626 319 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 SLC16A7O60669 478 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 ENTPD6O75354 484 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 MPZL1O95297 269 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 HMGN1P05114 100 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 QDPRP09417 244 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 CEACAM8P31997 349 aaPredicted RBP12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 CDAP32320 146 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 TIMP3P35625 211 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 MAD2L1BPQ15013 274 aaPredicted RBP12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 KLHL12Q53G59 568 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 GTF2IRD2BQ6EKJ0 949 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 CXXC5Q7LFL8 322 aaKnown RBP12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 GTF2IRD2Q86UP8 949 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 UBE2J2Q8N2K1 259 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 NOXO1Q8NFA2 376 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 OR6N1Q8NGY5 312 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 RHOXF1Q8NHV9 184 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 TMEM163Q8TC26 289 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 FOXD3Q9UJU5 478 aaPredicted RBP12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 BAIAP2Q9UQB8 552 aa12.83□□□□□ -0.36
CNTNAP2-225ENST00000639247 SH3D21A4FU49 640 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 IDH3BO43837 385 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 IGHG1P01857 330 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 ZNF3P17036 446 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 PTGER4P35408 488 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 TSC22D1Q15714 1073 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 LUZP2Q86TE4 346 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 ZNF100Q8IYN0 542 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 C8orf59Q8N0T1 100 aaPredicted RBP12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 ZNF610Q8N9Z0 462 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 SGCDQ92629 289 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 MCHR2Q969V1 340 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 APH1AQ96BI3 265 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 NMD3Q96D46 503 aaKnown RBP12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 CRLF2Q9HC73 371 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 GLTPQ9NZD2 209 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 LRRC42Q9Y546 428 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 NPIPB13A6NJU9 1138 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 NPIPB4C9JG80 1138 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 PRR23D1E9PI22 279 aaPredicted RBP12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 E9PLN8 166 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 SCG5P05408 212 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 PRR23D2P0DMB1 279 aaPredicted RBP12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 RPS27P42677 84 aaKnown RBP12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 HSPA13P48723 471 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 CSNK1A1P48729 337 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 FAPQ12884 760 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 HIST3H3Q16695 136 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 MEP1BQ16820 701 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 C20orf196Q8IYI0 205 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 TMEM45BQ96B21 275 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 ZNF582Q96NG8 517 aaPredicted RBP12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 APOL4Q9BPW4 351 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 VKORC1Q9BQB6 163 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 NMNAT2Q9BZQ4 307 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 NDEL1Q9GZM8 345 aa12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 COA3Q9Y2R0 106 aaPredicted RBP12.82□□□□□ -0.36
CNTNAP2-225ENST00000639247 USP9XQ93008 2570 aaPredicted RBP12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 NCOA6Q14686 2063 aaPredicted RBP12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 EIF4E1BA6NMX2 242 aaKnown RBP12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 XPNPEP2O43895 674 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 SLC43A1O75387 559 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 CGAP01215 116 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 IFNGP01579 166 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 PSKH1P11801 424 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 SPI1P17947 270 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 MYF6P23409 242 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 CENPAP49450 140 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 CASP6P55212 293 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 ADORA2A-AS1P86434 159 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 CDK5R2Q13319 367 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 AADACL4Q5VUY2 407 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 TFAP2EQ6VUC0 442 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 SHFQ7M4L6 423 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 ZNF511Q8NB15 262 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 GALNT11Q8NCW6 608 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 OR8J1Q8NGP2 316 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 OR6K6Q8NGW6 343 aa12.81□□□□□ -0.36
CNTNAP2-225ENST00000639247 TMEM54Q969K7 222 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms