RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 KIR3DL2P43630 455 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 CCR4P51679 360 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 NFATC4Q14934 902 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 ZNF74Q16587 644 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 ITPRIPL2Q3MIP1 535 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 MESTQ5EB52 335 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 SDR16C5Q8N3Y7 309 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 BCORP1Q8N888 145 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 TSEN15Q8WW01 171 aaKnown RBP9.9□□□□□ -0.82
SNIP1-204ENST00000638725 ATOH1Q92858 354 aaPredicted RBP9.9□□□□□ -0.82
SNIP1-204ENST00000638725 RBM18Q96H35 190 aaKnown RBP9.9□□□□□ -0.82
SNIP1-204ENST00000638725 WDR92Q96MX6 357 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 SLC38A3Q99624 504 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 GAL3ST1Q99999 423 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 CCDC3Q9BQI4 270 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 TWSG1Q9GZX9 223 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 POFUT1Q9H488 388 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 HIF3AQ9Y2N7 669 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 OR10H1Q9Y4A9 318 aa9.9□□□□□ -0.82
SNIP1-204ENST00000638725 CACNA1CQ13936 2221 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 LINC01553A4QN01 128 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 RFPL4AA6NLU0 287 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 RFPL4AL1F8VTS6 287 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 OIP5O43482 229 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 CT45A8P0DMV1 189 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 CT45A9P0DMV2 189 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 PRSS3P35030 304 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 ERV3-1Q14264 604 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 MPPED2Q15777 294 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 C2orf76Q3KRA6 126 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 CT45A2Q5DJT8 189 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 LY6G6FQ5SQ64 297 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 STEAP1BQ6NZ63 245 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 ZNF761Q86XN6 746 aaPredicted RBP9.9□□□□□ -0.83
SNIP1-204ENST00000638725 EIF4E3Q8N5X7 224 aaKnown RBP9.9□□□□□ -0.83
SNIP1-204ENST00000638725 CLEC1AQ8NC01 280 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 DNAJA3Q96EY1 480 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 CRISPLD2Q9H0B8 497 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 IFT46Q9NQC8 304 aa9.9□□□□□ -0.83
SNIP1-204ENST00000638725 FANCMQ8IYD8 2048 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 TMEM212A6NML5 194 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 PRAMEF2O60811 474 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 TPPPO94811 219 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 PLATP00750 562 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 POU2F2P09086 479 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 ATXN8OSP0DMR3 200 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 ALOX5APP20292 161 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 CCKBRP32239 447 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 ARHGDIBP52566 201 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 SCAND1P57086 179 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 GRM7Q14831 915 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 WDR38Q5JTN6 314 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 TMED4Q7Z7H5 227 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 GABRG1Q8N1C3 465 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 PXT1Q8NFP0 134 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 ST8SIA2Q92186 375 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 FAM3DQ96BQ1 224 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 TSPAN32Q96QS1 320 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 ELF4Q99607 663 aaPredicted RBP9.89□□□□□ -0.83
SNIP1-204ENST00000638725 LPAR4Q99677 370 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 HRASLS2Q9NWW9 162 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 ALPK2Q86TB3 2170 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 NUP210LQ5VU65 1888 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 C2orf74A8MZ97 194 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 M0QYG6 137 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 DNASE2O00115 360 aaPredicted RBP9.89□□□□□ -0.83
SNIP1-204ENST00000638725 WNT11O96014 354 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 MYOGP15173 224 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 FNTBP49356 437 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 RPL18Q07020 188 aaKnown RBP9.89□□□□□ -0.83
SNIP1-204ENST00000638725 CD226Q15762 336 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 ARHGAP40Q5TG30 622 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 ZNF546Q86UE3 836 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 OR10K1Q8NGX5 313 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 C16orf52Q8NHV5 167 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 MCHR2Q969V1 340 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 MARC2Q969Z3 335 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 PPP1R14AQ96A00 147 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 ZNF524Q96C55 264 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 BMFQ96LC9 184 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 C4orf45Q96LM5 186 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 FOXN4Q96NZ1 517 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 KLHDC3Q9BQ90 382 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 KXD1Q9BQD3 176 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 G6PC3Q9BUM1 346 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 SLC19A3Q9BZV2 496 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 ATG5Q9H1Y0 275 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 WDR13Q9H1Z4 485 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 SYT4Q9H2B2 425 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 FAM60AQ9NP50 221 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 MMP25Q9NPA2 562 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 GRHPRQ9UBQ7 328 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 KCNG2Q9UJ96 466 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 ERVK-19Q9WJR5 959 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 SLC6A5Q9Y345 797 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 COL4A2P08572 1712 aa9.89□□□□□ -0.83
SNIP1-204ENST00000638725 A0A0A6YYC8 382 aaPredicted RBP9.88□□□□□ -0.83
SNIP1-204ENST00000638725 A0A0J9YY10 115 aa9.88□□□□□ -0.83
SNIP1-204ENST00000638725 I3L1I5 382 aaPredicted RBP9.88□□□□□ -0.83
SNIP1-204ENST00000638725 CDC40O60508 579 aaKnown RBP eCLIP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms