RNA–Protein interactions for RNA: ENST00000638589.1

HNRNPU-215, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 2

Gene HNRNPU, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-215	ENST00000638589	OBSL1	O75147	1896 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	ZNF638	Q14966	1978 aa	Known RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589		A0A0J9YYE9	177 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	SMIM28	A0A1B0GU29	152 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	FAM240B	A0A1B0GVZ2	78 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589		A0A1W2PRB8	838 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	PQLC2L	A1A4F0	135 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	EVPLL	A8MZ36	301 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	ZNF487	B1APH4	448 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	SMIM1	B2RUZ4	78 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	PIR	O00625	290 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	GAPDHS	O14556	408 aa	Predicted RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	TOX3	O15405	576 aa	Predicted RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	UGT1A9	O60656	530 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	SDC3	O75056	442 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	LSM8	O95777	96 aa	Known RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	TRBC1	P01850	177 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	SERPINE2	P07093	398 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	GP1BA	P07359	652 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	UQCRB	P14927	111 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	RAB3A	P20336	220 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	MSR1	P21757	451 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	UGT1A4	P22310	534 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	HTR2A	P28223	471 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	TEAD1	P28347	426 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	HOXA9	P31269	272 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	UGT1A3	P35503	534 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	UGT1A5	P35504	534 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	ALDH3B2	P48448	385 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	RAB9A	P51151	201 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	NR0B1	P51843	470 aa	Known RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	EMP2	P54851	167 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	DCDC1	P59894	354 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	CKAP4	Q07065	602 aa	Known RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	STX5	Q13190	355 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	CAPRIN1	Q14444	709 aa	Known RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	TRAM2	Q15035	370 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	TSC22D1	Q15714	1073 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	CCDC6	Q16204	474 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	TRIM16L	Q309B1	348 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	YIF1B	Q5BJH7	314 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589		Q5BKY6	102 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	XKR6	Q5GH73	641 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	AGAP6	Q5VW22	663 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	CYB5R2	Q6BCY4	276 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	RFWD3	Q6PCD5	774 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	ZNF546	Q86UE3	836 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	ANKRD46	Q86W74	232 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	MICU2	Q8IYU8	434 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	C4orf33	Q8N1A6	199 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	OR2T11	Q8NH01	316 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	OR6X1	Q8NH79	312 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	U2AF1L4	Q8WU68	220 aa	Known RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	ACOT11	Q8WXI4	607 aa	Predicted RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	FBXO17	Q96EF6	278 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	HPDL	Q96IR7	371 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	FOPNL	Q96NB1	174 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	CSPG4P5	Q96PW8	444 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	FMO2	Q99518	471 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	C20orf24	Q9BUV8	137 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	PAPOLG	Q9BWT3	736 aa	Known RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	HDHD2	Q9H0R4	259 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	C1orf198	Q9H425	327 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	IKZF5	Q9H5V7	419 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	UGT1A7	Q9HAW7	530 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	UGT1A8	Q9HAW9	530 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	GDF3	Q9NR23	364 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	RGS18	Q9NS28	235 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	CISH	Q9NSE2	258 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	UFSP2	Q9NUQ7	469 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	IMP3	Q9NV31	184 aa	Known RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	MED17	Q9NVC6	651 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	THUMPD1	Q9NXG2	353 aa	Known RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	NAGK	Q9UJ70	344 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	TBX21	Q9UL17	535 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	TFR2	Q9UP52	801 aa		3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	SAMHD1	Q9Y3Z3	626 aa	Known RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	TSSC4	Q9Y5U2	329 aa	Predicted RBP	3	□□□□□ -1.93
HNRNPU-215	ENST00000638589	MN1	Q10571	1320 aa	Predicted RBP	2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	PLXNA4	Q9HCM2	1894 aa		2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	KIAA0100	Q14667	2235 aa	Known RBP	2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	NPIPA5	A0A0B4J1W7	369 aa		2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589		A0A1B0GV90	55 aa		2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	HACD1	B0YJ81	288 aa		2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589		C9JVG2	144 aa		2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	NPIPA5	E9PKD4	350 aa		2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	NPIPA3	F8WFD2	350 aa		2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589		H0YL77	283 aa		2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	AIRE	O43918	545 aa		2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	PRKRA	O75569	313 aa	Known RBP	2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	APOH	P02749	345 aa	Predicted RBP	2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	KLK3	P07288	261 aa	Predicted RBP	2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	H2AFZ	P0C0S5	128 aa		2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	UBC	P0CG48	685 aa	Known RBP	2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	IDS	P22304	550 aa		2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	F8A1	P23610	371 aa		2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	SRD5A2	P31213	254 aa		2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	HMGCL	P35914	325 aa		2.99	□□□□□ -1.93
HNRNPU-215	ENST00000638589	UGT2B10	P36537	528 aa		2.99	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms