RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 TRBV5-5A0A0J9YX44 114 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 MEN1O00255 615 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 CD3GP09693 182 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 APOBEC1P41238 236 aaKnown RBP19.36■□□□□ 0.69
CLN6-224ENST00000638076 MMP15P51511 669 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 SUMO3P55854 103 aaPredicted RBP19.36■□□□□ 0.69
CLN6-224ENST00000638076 DGCR2P98153 550 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 ODF4Q2M2E3 257 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 SLC36A2Q495M3 483 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 FAM69BQ5VUD6 431 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 LRRN1Q6UXK5 716 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 PRR23CQ6ZRP0 262 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 CMTM4Q8IZR5 234 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 PRSS35Q8N3Z0 413 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 ZNF676Q8N7Q3 588 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 OR8K3Q8NH51 312 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 ADAMTS14Q8WXS8 1223 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 YIPF5Q969M3 257 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 BEX2Q9BXY8 128 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 COMMD4Q9H0A8 199 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 RANGRFQ9HD47 186 aaPredicted RBP19.36■□□□□ 0.69
CLN6-224ENST00000638076 CAMK2AQ9UQM7 478 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 ORC5O43913 435 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 GDF9O60383 454 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 ADRB1P08588 477 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 NAGAP17050 411 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 PUDPQ08623 228 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 OR7A5Q15622 319 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 MEP1BQ16820 701 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 TMEM205Q6UW68 189 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 ZNF248Q8NDW4 579 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 CAPSLQ8WWF8 208 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 CMTM3Q96MX0 182 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 SLITRK2Q9H156 845 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 MYOTQ9UBF9 498 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 HRH3Q9Y5N1 445 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 WDR87Q6ZQQ6 2873 aa19.36■□□□□ 0.69
CLN6-224ENST00000638076 CPAMD8Q8IZJ3 1885 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 MS4A18H0YCH9 400 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 H3BSH0 61 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 ZFAND5O76080 213 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 CLDN12P56749 244 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 FOXF1Q12946 379 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 MS4A18Q3C1V0 323 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 HACD4Q5VWC8 232 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 FAM199XQ6PEV8 388 aaPredicted RBP19.35■□□□□ 0.69
CLN6-224ENST00000638076 IZUMO1Q8IYV9 350 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 TTC9Q92623 222 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 ATOH1Q92858 354 aaPredicted RBP19.35■□□□□ 0.69
CLN6-224ENST00000638076 CREB3L1Q96BA8 519 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 FYTTD1Q96QD9 318 aaKnown RBP19.35■□□□□ 0.69
CLN6-224ENST00000638076 OR8B4Q96RC9 309 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 LIN7BQ9HAP6 207 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 ELOVL3Q9HB03 270 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 PRMT8Q9NR22 394 aaPredicted RBP19.35■□□□□ 0.69
CLN6-224ENST00000638076 TMEM212A6NML5 194 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 HSPB2A8KAH6 182 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 PATE3B3GLJ2 98 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 INMT-MINDY4F8WBC2 141 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 YKT6O15498 198 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 OR2J2O76002 312 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 SPARCP09486 303 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 CCKBRP32239 447 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 BLVRAP53004 296 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 RAB25P57735 213 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 HSPB2Q16082 182 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 PLA1AQ53H76 456 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 TOMM5Q8N4H5 51 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 OR51A4Q8NGJ6 313 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 OR10AC1Q8NH08 325 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 OR6S1Q8NH40 331 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 RNF138Q8WVD3 245 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 DCBLD2Q96PD2 775 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 GFM1Q96RP9 751 aaKnown RBP19.35■□□□□ 0.69
CLN6-224ENST00000638076 ULBP3Q9BZM4 244 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 SLC26A1Q9H2B4 701 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 PPP4R1LQ9P1A2 415 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 C19orf25Q9UFG5 118 aaPredicted RBP19.35■□□□□ 0.69
CLN6-224ENST00000638076 ADAMTS9Q9P2N4 1935 aa19.35■□□□□ 0.69
CLN6-224ENST00000638076 CFAP54Q96N23 3096 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 SHISA8B8ZZ34 492 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 ZNF254O75437 659 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 DPP4P27487 766 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 BTCP35070 178 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 ADAM8P78325 824 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 CD83Q01151 205 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 RASGEF1BQ0VAM2 473 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 NTRK2Q16620 822 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 BAIAP2L2Q6UXY1 529 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 FCRLAQ7L513 359 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 PRSS45Q7RTY3 260 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 MFSD8Q8NHS3 518 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 ASB17Q8WXJ9 295 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 C4orf45Q96LM5 186 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 CENPXA8MT69 81 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 ZNF432O94892 652 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 ADRA2CP18825 462 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 KIR3DL2P43630 455 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 SLC17A1Q14916 467 aa19.34■□□□□ 0.69
CLN6-224ENST00000638076 WDR38Q5JTN6 314 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms