RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 B9A039 149 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 MCIDASD6RGH6 385 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 TRMUO75648 421 aaKnown RBP15.3■□□□□ 0.04
PNKP-230ENST00000638016 PDE5AO76074 875 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 F12P00748 615 aaPredicted RBP15.3■□□□□ 0.04
PNKP-230ENST00000638016 SERPINA1P01009 418 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 ZNF35P13682 527 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 DRD4P21917 467 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 PAX7P23759 505 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 CLRN1P58418 232 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 FMODQ06828 376 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 TOP3AQ13472 1001 aaPredicted RBP15.3■□□□□ 0.04
PNKP-230ENST00000638016 DAG1Q14118 895 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 CARTPTQ16568 116 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 MALRD1Q5VYJ5 2156 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 TSEN54Q7Z6J9 526 aaKnown RBP15.3■□□□□ 0.04
PNKP-230ENST00000638016 NRMQ8IXM6 262 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 CCDC36Q8IYA8 594 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 OR4K5Q8NGD3 323 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 HDAC2Q92769 488 aaKnown RBP15.3■□□□□ 0.04
PNKP-230ENST00000638016 MRPL13Q9BYD1 178 aaKnown RBP15.3■□□□□ 0.04
PNKP-230ENST00000638016 POLR2J2Q9GZM3 115 aaKnown RBP15.3■□□□□ 0.04
PNKP-230ENST00000638016 POLR2J3Q9H1A7 115 aaKnown RBP15.3■□□□□ 0.04
PNKP-230ENST00000638016 YAE1D1Q9NRH1 226 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 FZR1Q9UM11 496 aa15.3■□□□□ 0.04
PNKP-230ENST00000638016 TRAV27A0A087WT01 109 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 A0A1W2PRG6 482 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 GSTA4O15217 222 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 CD5LO43866 347 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 PRSS23O95084 383 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 RAB36O95755 333 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 IGHG1P01857 330 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 TSPAN19P0C672 248 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 THRBP10828 461 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 BMP4P12644 408 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 CCL2P13500 99 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 NPR2P20594 1047 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 NR4A1P22736 598 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 CDAP32320 146 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 PSME3P61289 254 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 ST3GAL3Q11203 375 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 HIST3H3Q16695 136 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 TMEM249Q2WGJ8 235 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 ARMC4Q5T2S8 1044 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 TBPL2Q6SJ96 375 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 CBLL1Q75N03 491 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 OFCC1Q8IZS5 231 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 PAQR4Q8N4S7 273 aaPredicted RBP15.29■□□□□ 0.04
PNKP-230ENST00000638016 RNF148Q8N7C7 305 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 LIPHQ8WWY8 451 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 BPIFA2Q96DR5 249 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 SEPHS2Q99611 448 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 DOK1Q99704 481 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 MRPL37Q9BZE1 423 aaKnown RBP15.29■□□□□ 0.04
PNKP-230ENST00000638016 EFCAB1Q9HAE3 211 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 MOV10Q9HCE1 1003 aaKnown RBP15.29■□□□□ 0.04
PNKP-230ENST00000638016 EGFL7Q9UHF1 273 aa15.29■□□□□ 0.04
PNKP-230ENST00000638016 SNX3O60493 162 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 UBL3O95164 117 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 IFNW1P05000 195 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 OR8G3PP0DMU2 310 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 ACADSP16219 412 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 FHL1Q13642 323 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 IFI44LQ53G44 452 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 HACD2Q6Y1H2 254 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 PIWIL3Q7Z3Z3 882 aaKnown RBP15.28■□□□□ 0.04
PNKP-230ENST00000638016 LRP11Q86VZ4 500 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 LRRC18Q8N456 261 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 FAM86B1Q8N7N1 296 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 LRRC75AQ8NAA5 344 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 FAM156AQ8NDB6 213 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 OR13C2Q8NGS9 318 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 GEMIN6Q8WXD5 167 aaKnown RBP15.28■□□□□ 0.04
PNKP-230ENST00000638016 LZICQ8WZA0 190 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 FAM162AQ96A26 154 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 NMD3Q96D46 503 aaKnown RBP15.28■□□□□ 0.04
PNKP-230ENST00000638016 HOPXQ9BPY8 73 aaPredicted RBP15.28■□□□□ 0.04
PNKP-230ENST00000638016 KCTD14Q9BQ13 255 aaPredicted RBP15.28■□□□□ 0.04
PNKP-230ENST00000638016 SYT3Q9BQG1 590 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 OR51B6Q9H340 312 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 TPK1Q9H3S4 243 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 MYEF2Q9P2K5 600 aaKnown RBP15.28■□□□□ 0.04
PNKP-230ENST00000638016 ABCD2Q9UBJ2 740 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 UGT2A1Q9Y4X1 527 aa15.28■□□□□ 0.04
PNKP-230ENST00000638016 A0A087WUU8 490 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 VWC2LB2RUY7 222 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 ATP8B1O43520 1251 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 IGF2P01344 180 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 TP53P04637 393 aaPredicted RBP15.27■□□□□ 0.04
PNKP-230ENST00000638016 SLC25A16P16260 332 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 LSP1P33241 339 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 GPR4P46093 362 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 PPOXP50336 477 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 DAP3P51398 398 aaKnown RBP15.27■□□□□ 0.04
PNKP-230ENST00000638016 DSCR9P59020 149 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 LOXL1Q08397 574 aaPredicted RBP15.27■□□□□ 0.04
PNKP-230ENST00000638016 GGTLC2Q14390 218 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 MAD2L1BPQ15013 274 aaPredicted RBP15.27■□□□□ 0.04
PNKP-230ENST00000638016 ALG10Q5BKT4 473 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 FKBP9P1Q75LS8 142 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms