RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	ITGA5	P08648	1049 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	LINC00614	P0C842	121 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	CALCB	P10092	127 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	NME1	P15531	152 aa	Known RBP	9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	HLA-G	P17693	338 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	NDUFS1	P28331	727 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	WAS	P42768	502 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	RAB28	P51157	221 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	OR2B8P	P59922	312 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	TRA2B	P62995	288 aa	Known RBP	9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	TNFRSF9	Q07011	255 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	GAGE1	Q13065	139 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	KHDRBS2	Q5VWX1	349 aa	Known RBP	9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	PAPD4	Q6PIY7	484 aa	Known RBP	9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	SPNS3	Q6ZMD2	512 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	GLB1L2	Q8IW92	636 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	SFTPA1	Q8IWL2	248 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	BAP18	Q8IXM2	172 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	INO80E	Q8NBZ0	244 aa	Predicted RBP	9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	OR6T1	Q8NGN1	323 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	PIGX	Q8TBF5	258 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	PRRC1	Q96M27	445 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	TIMP4	Q99727	224 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	GPA33	Q99795	319 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	PIGQ	Q9BRB3	760 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	NDUFAF3	Q9BU61	184 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	MS4A8	Q9BY19	250 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	PLA2G2F	Q9BZM2	168 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	LAT2	Q9GZY6	243 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	SEMA6C	Q9H3T2	930 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	EGLN3	Q9H6Z9	239 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	LMAN1L	Q9HAT1	526 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	NEUROD4	Q9HD90	331 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	CALML5	Q9NZT1	146 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	KLK11	Q9UBX7	282 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	TMED3	Q9Y3Q3	217 aa		9.82	□□□□□ -0.84
CHD2-223	ENST00000636306	IFITM10	A6NMD0	228 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	MAGEB4	O15481	346 aa	Predicted RBP	9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	FAM157C	P0CG43	387 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	ALPPL2	P10696	532 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	DPP4	P27487	766 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	DCTD	P32321	178 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	AHR	P35869	848 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	KIR2DL1	P43626	348 aa	Predicted RBP	9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	TAS2R50	P59544	299 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	SSBP1	Q04837	148 aa	Known RBP	9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	KIAA0141	Q14154	515 aa	Predicted RBP	9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	PGGHG	Q32M88	737 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	TMEM35A	Q53FP2	167 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	AKIRIN2	Q53H80	203 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	SAPCD1	Q5SSQ6	148 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	HIST2H3PS2	Q5TEC6	136 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	PARM1	Q6UWI2	310 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	GJD3	Q8N144	294 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	UBAC2	Q8NBM4	344 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	STEAP2	Q8NFT2	490 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	OR4D11	Q8NGI4	311 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	OR2L8	Q8NGY9	312 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	HMGB4	Q8WW32	186 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	TCTN2	Q96GX1	697 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	RBM18	Q96H35	190 aa	Known RBP	9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	PGLYRP3	Q96LB9	341 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	CAMK1G	Q96NX5	476 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	NECAB3	Q96P71	396 aa	Predicted RBP	9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	IL17F	Q96PD4	163 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	ORAI3	Q9BRQ5	295 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	SLC17A9	Q9BYT1	436 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	NCOR1P1	Q9H4R4	102 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	TMEM231	Q9H6L2	316 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	NRIP3	Q9NQ35	241 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	ICK	Q9UPZ9	632 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	SH2B3	Q9UQQ2	575 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	SLC17A4	Q9Y2C5	497 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	ETV7	Q9Y603	341 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	TRPM6	Q9BX84	2022 aa		9.81	□□□□□ -0.84
CHD2-223	ENST00000636306	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	9.8	□□□□□ -0.84
CHD2-223	ENST00000636306		A0A1W2PPH5	198 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306		A0A1W2PQU0	124 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306		H7BY64	318 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306		H7C417	338 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	OGG1	O15527	345 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	NDUFS4	O43181	175 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	MED6	O75586	246 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	CLEC3A	O75596	197 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	KLK1	P06870	262 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	HOXB2	P14652	356 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	BMP7	P18075	431 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	MPZ	P25189	248 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	SOAT1	P35610	550 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	GSK3A	P49840	483 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	CASP9	P55211	416 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	SEC13	P55735	322 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	RGS8	P57771	180 aa	Predicted RBP	9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	LSM6	P62312	80 aa	Known RBP	9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	PPP2CB	P62714	309 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	PPP2CA	P67775	309 aa		9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	AIMP2	Q13155	320 aa	Known RBP	9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	SURF2	Q15527	256 aa	Predicted RBP	9.8	□□□□□ -0.84
CHD2-223	ENST00000636306	ALG11	Q2TAA5	492 aa		9.8	□□□□□ -0.84

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