RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 DPY19L2P2Q6ZN68 376 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 ZNF620Q6ZNG0 422 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 ARIH2OSQ8N7S6 290 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 WDR31Q8NA23 367 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 FNDC8Q8TC99 324 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 MAGEE2Q8TD90 523 aaPredicted RBP13.56□□□□□ -0.24
CLN6-211ENST00000635754 HDAC2Q92769 488 aaKnown RBP13.56□□□□□ -0.24
CLN6-211ENST00000635754 BCL2L2Q92843 193 aaPredicted RBP13.56□□□□□ -0.24
CLN6-211ENST00000635754 DUS3LQ96G46 650 aaKnown RBP13.56□□□□□ -0.24
CLN6-211ENST00000635754 FOXB1Q99853 325 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 ALG12Q9BV10 488 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 DGCR6LQ9BY27 220 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 ESRP2Q9H6T0 727 aaKnown RBP13.56□□□□□ -0.24
CLN6-211ENST00000635754 NRIP3Q9NQ35 241 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 ARMC1Q9NVT9 282 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 AP4S1Q9Y587 144 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 PRR14LQ5THK1 2151 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 NBPF19A0A087WUL8 3843 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 TACC2O95359 2948 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 DHHO43323 396 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 SEC14L2O76054 403 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 FCGR1AP12314 374 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 HOXB1P14653 301 aaPredicted RBP13.56□□□□□ -0.24
CLN6-211ENST00000635754 ZNF84P51523 738 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 ARHGDIAP52565 204 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 MYBPC1Q00872 1141 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 LRFN4Q6PJG9 635 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 KLHL17Q6TDP4 642 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 ZNF813Q6ZN06 617 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 ZNF627Q7L945 461 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 FAM122BQ7Z309 247 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 OR52L1Q8NGH7 329 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 MCHR2Q969V1 340 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 GTPBP3Q969Y2 492 aaKnown RBP13.56□□□□□ -0.24
CLN6-211ENST00000635754 PLPPR2Q96GM1 343 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 Q96M85 177 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 NELFAQ9H3P2 528 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 SMURF2Q9HAU4 748 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 CDH10Q9Y6N8 788 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 ABCA4P78363 2273 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 ARPC4-TTLL3A0A0A6YYG9 625 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 TEX13CA0A0J9YWL9 993 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 ARHGEF9O43307 516 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 ENTPD5O75356 428 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 APEHP13798 732 aaKnown RBP13.55□□□□□ -0.24
CLN6-211ENST00000635754 B4GALT1P15291 398 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 PAX7P23759 505 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 FASP25445 335 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 ZNF83P51522 516 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 ACTR3P61158 418 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 KRR1Q13601 381 aaKnown RBP13.55□□□□□ -0.24
CLN6-211ENST00000635754 KPNB1Q14974 876 aaKnown RBP13.55□□□□□ -0.24
CLN6-211ENST00000635754 MESTQ5EB52 335 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 THEM4Q5T1C6 240 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 RASSF6Q6ZTQ3 369 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 TMEM179BQ7Z7N9 219 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 CDC20BQ86Y33 519 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 CCDC36Q8IYA8 594 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 SAMD8Q96LT4 415 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 RBP7Q96R05 134 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 FEVQ99581 238 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 IFT27Q9BW83 186 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 MOV10Q9HCE1 1003 aaKnown RBP13.55□□□□□ -0.24
CLN6-211ENST00000635754 NPAP1Q9NZP6 1156 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 PDP1Q9P0J1 537 aaPredicted RBP13.55□□□□□ -0.24
CLN6-211ENST00000635754 IER3IP1Q9Y5U9 82 aa13.55□□□□□ -0.24
CLN6-211ENST00000635754 SOCS2O14508 198 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 SLC2A10O95528 541 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 PPP1R3DO95685 299 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 CAPZA2P47755 286 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 ZNF133P52736 654 aaPredicted RBP13.54□□□□□ -0.24
CLN6-211ENST00000635754 KRTAP10-9P60411 292 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 FMODQ06828 376 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 ATP6AP1Q15904 470 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 NCMAPQ5T1S8 102 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 C10orf128Q5T292 105 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 TMEM108Q6UXF1 575 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 ADCK1Q86TW2 530 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 CLDN22Q8N7P3 220 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 NANOS1Q8WY41 292 aaKnown RBP13.54□□□□□ -0.24
CLN6-211ENST00000635754 RASD2Q96D21 266 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 LURAP1Q96LR2 239 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 ERMAPQ96PL5 475 aaPredicted RBP13.54□□□□□ -0.24
CLN6-211ENST00000635754 BDH2Q9BUT1 245 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 EGLN3Q9H6Z9 239 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 ZNF556Q9HAH1 456 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 NTN4Q9HB63 628 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 TMEM38BQ9NVV0 291 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 IL20Q9NYY1 176 aa13.54□□□□□ -0.24
CLN6-211ENST00000635754 PRSS37A4D1T9 235 aa13.53□□□□□ -0.24
CLN6-211ENST00000635754 H7C1C5 153 aa13.53□□□□□ -0.24
CLN6-211ENST00000635754 M0R1B8 84 aa13.53□□□□□ -0.24
CLN6-211ENST00000635754 IMPA2O14732 288 aa13.53□□□□□ -0.24
CLN6-211ENST00000635754 AHCYL1O43865 530 aa13.53□□□□□ -0.24
CLN6-211ENST00000635754 TXNDC12O95881 172 aa13.53□□□□□ -0.24
CLN6-211ENST00000635754 CD3EP07766 207 aa13.53□□□□□ -0.24
CLN6-211ENST00000635754 LOXP28300 417 aaPredicted RBP13.53□□□□□ -0.24
CLN6-211ENST00000635754 NOS3P29474 1203 aa13.53□□□□□ -0.24
CLN6-211ENST00000635754 LCN6P62502 163 aa13.53□□□□□ -0.24
CLN6-211ENST00000635754 BSPH1Q075Z2 132 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms