RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 OR9Q2Q8NGE9 314 aa12.9□□□□□ -0.34
CDC42BPB-209ENST00000634889 HDAC2Q92769 488 aaKnown RBP12.9□□□□□ -0.34
CDC42BPB-209ENST00000634889 MCHR2Q969V1 340 aa12.9□□□□□ -0.34
CDC42BPB-209ENST00000634889 VNN3Q9NY84 501 aa12.9□□□□□ -0.34
CDC42BPB-209ENST00000634889 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.9□□□□□ -0.34
CDC42BPB-209ENST00000634889 ADAM18Q9Y3Q7 739 aa12.9□□□□□ -0.34
CDC42BPB-209ENST00000634889 RNF115Q9Y4L5 304 aa12.9□□□□□ -0.34
CDC42BPB-209ENST00000634889 U3KQV3 271 aa12.9□□□□□ -0.34
CDC42BPB-209ENST00000634889 A0A096LPE4 126 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 A0A1W2PPR1 153 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 A0A1W2PPZ6 126 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 DPRXA6NFQ7 191 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 GNGT2O14610 69 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 MGRN1O60291 552 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 ZNF84P51523 738 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 RPS6KA3P51812 740 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 ERVK-25P63136 954 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 BSPH1Q075Z2 132 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 CD47Q08722 323 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 RFX4Q33E94 735 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 THEM4Q5T1C6 240 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 C10orf128Q5T292 105 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 THSD4Q6ZMP0 1018 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 ZNF813Q6ZN06 617 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 ZNF704Q6ZNC4 412 aaPredicted RBP12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 ZNF620Q6ZNG0 422 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 SYT14Q8NB59 555 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 AQP11Q8NBQ7 271 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 SLCO4A1Q96BD0 722 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 NMD3Q96D46 503 aaKnown RBP12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 RADILQ96JH8 1075 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 ZNF570Q96NI8 536 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 OR52D1Q9H346 318 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 TMEM38BQ9NVV0 291 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 DNAJB9Q9UBS3 223 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 MGAT4BQ9UQ53 548 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 PDZD2O15018 2839 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 CSMD2Q7Z408 3487 aa12.89□□□□□ -0.35
CDC42BPB-209ENST00000634889 XKRYO14609 159 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 SEC14L2O76054 403 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 TXNDC12O95881 172 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 GASTP01350 101 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 OR8G3PP0DMU2 310 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 B4GALT1P15291 398 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 GSTM3P21266 225 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 CD40P25942 277 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 SLC6A6P31641 620 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 ERFP50548 548 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 ZNF83P51522 516 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 KRR1Q13601 381 aaKnown RBP12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 ADAM5Q6NVV9 412 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 YTHDF3Q7Z739 585 aaKnown RBP12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 ADCK1Q86TW2 530 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 CDH24Q86UP0 819 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 CLDN22Q8N7P3 220 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 OR10G2Q8NGC3 310 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 NANOS1Q8WY41 292 aaKnown RBP12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 NINJ1Q92982 152 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 UTP4Q969X6 686 aaKnown RBP12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 DUS3LQ96G46 650 aaKnown RBP12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 Q96M85 177 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 RBP7Q96R05 134 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 DGCR6LQ9BY27 220 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 DENND2DQ9H6A0 471 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 ARMC1Q9NVT9 282 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 CRNNQ9UBG3 495 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 IL20RAQ9UHF4 553 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 CDH10Q9Y6N8 788 aa12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 RAI1Q7Z5J4 1906 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPB-209ENST00000634889 TEX13CA0A0J9YWL9 993 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 M0R1B8 84 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 ABCD4O14678 606 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 IMPA2O14732 288 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 ARPC3O15145 178 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 ARHGEF9O43307 516 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 IDH3BO43837 385 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 DEAF1O75398 565 aaPredicted RBP12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 E2F6O75461 281 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 FARS2O95363 451 aaKnown RBP12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 SLC2A10O95528 541 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 IGKV3-15P01624 115 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 IGLV1-44P01699 117 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 MYBPC1Q00872 1141 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 PPP1R8Q12972 351 aaKnown RBP12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 CCNIQ14094 377 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 MESTQ5EB52 335 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 PAMR1Q6UXH9 720 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 CD300LDQ6UXZ3 194 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 RASSF6Q6ZTQ3 369 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 DPPA2Q7Z7J5 298 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 SLC22A24Q8N4F4 322 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 OR52L1Q8NGH7 329 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 GIPC3Q8TF64 312 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 SLC38A2Q96QD8 506 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 C1QTNF6Q9BXI9 259 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 IL20Q9NYY1 176 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 ST6GALNAC2Q9UJ37 374 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 IER3IP1Q9Y5U9 82 aa12.87□□□□□ -0.35
CDC42BPB-209ENST00000634889 ALPK2Q86TB3 2170 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 PRSS37A4D1T9 235 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms