RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 NUP50Q9UKX7 468 aa2.53□□□□□ -2
VPS8-228ENST00000628962 VANGL2Q9ULK5 521 aa2.53□□□□□ -2
VPS8-228ENST00000628962 SAMD4AQ9UPU9 718 aaKnown RBP2.53□□□□□ -2
VPS8-228ENST00000628962 GMEB1Q9Y692 573 aa2.53□□□□□ -2
VPS8-228ENST00000628962 CHD7Q9P2D1 2997 aa2.53□□□□□ -2
VPS8-228ENST00000628962 ANKRD11Q6UB99 2663 aaPredicted RBP2.53□□□□□ -2.01
VPS8-228ENST00000628962 USP24Q9UPU5 2620 aa2.53□□□□□ -2.01
VPS8-228ENST00000628962 FASNP49327 2511 aaKnown RBP2.52□□□□□ -2.01
VPS8-228ENST00000628962 NCOR2Q9Y618 2525 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 MYH15Q9Y2K3 1946 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 SPEGQ15772 3267 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 IBTKQ9P2D0 1353 aaPredicted RBP2.52□□□□□ -2.01
VPS8-228ENST00000628962 DMXL1Q9Y485 3027 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 IGHV3-16A0A0C4DH30 117 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 LOC100131303A0A0U1RQF7 123 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 A0A1W2PPV9 198 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 HSBP1L1C9JCN9 74 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 K7ERQ8 282 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 SULT2B1O00204 365 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 E2F6O75461 281 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 SEMA4FO95754 770 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 SNAI1O95863 264 aaPredicted RBP2.52□□□□□ -2.01
VPS8-228ENST00000628962 ERCC1P07992 297 aaPredicted RBP2.52□□□□□ -2.01
VPS8-228ENST00000628962 KITLGP21583 273 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 HTR1FP30939 366 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 RRM2P31350 389 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 IFNA8P32881 189 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 XCR1P46094 333 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 DAOAP59103 153 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 RAB11AP62491 216 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 SCRN3Q0VDG4 424 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 DPYSL3Q14195 570 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 RAB11BQ15907 218 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 DUSP7Q16829 419 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 C17orf58Q2M2W7 97 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 HNRNPA1L2Q32P51 320 aaKnown RBP2.52□□□□□ -2.01
VPS8-228ENST00000628962 VPS26BQ4G0F5 336 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 EIPR1Q53HC9 387 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 C2CD6Q53TS8 623 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 ZNF506Q5JVG8 444 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 C9orf66Q5T8R8 295 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 TWF2Q6IBS0 349 aaKnown RBP2.52□□□□□ -2.01
VPS8-228ENST00000628962 OR52E8Q6IFG1 317 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 HSDL2Q6YN16 418 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 PGAP1Q75T13 922 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 MARCH9Q86YJ5 346 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 MFSD6LQ8IWD5 586 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 GABRG1Q8N1C3 465 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 PQLC3Q8N755 202 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 C4orf32Q8N8J7 132 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 OR4F6Q8NGB9 312 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 OR4K14Q8NGD5 310 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 OR52H1Q8NGJ2 320 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 TFB1MQ8WVM0 346 aaKnown RBP2.52□□□□□ -2.01
VPS8-228ENST00000628962 ARNTL2Q8WYA1 636 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 OR1E3Q8WZA6 343 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 UFD1Q92890 307 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 CIDECQ96AQ7 238 aaPredicted RBP2.52□□□□□ -2.01
VPS8-228ENST00000628962 KIAA1143Q96AT1 154 aaPredicted RBP2.52□□□□□ -2.01
VPS8-228ENST00000628962 TMIGD2Q96BF3 282 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 ZNF707Q96C28 371 aaPredicted RBP2.52□□□□□ -2.01
VPS8-228ENST00000628962 NRBF2Q96F24 287 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 PPP1R16AQ96I34 528 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 POM121L2Q96KW2 1035 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 MBOAT4Q96T53 435 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 RIOK1Q9BRS2 568 aaKnown RBP2.52□□□□□ -2.01
VPS8-228ENST00000628962 IL22Q9GZX6 179 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 TUBB1Q9H4B7 451 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 UBE2ZQ9H832 354 aaPredicted RBP2.52□□□□□ -2.01
VPS8-228ENST00000628962 CAB39LQ9H9S4 337 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 MRPS30Q9NP92 439 aaKnown RBP2.52□□□□□ -2.01
VPS8-228ENST00000628962 IMPAD1Q9NX62 359 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 SENP1Q9P0U3 644 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 KCNIP3Q9Y2W7 256 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 PLLPQ9Y342 182 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 RPL36Q9Y3U8 105 aaKnown RBP2.52□□□□□ -2.01
VPS8-228ENST00000628962 L3MBTL1Q9Y468 752 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 MAST4O15021 2626 aa2.52□□□□□ -2.01
VPS8-228ENST00000628962 UBR2Q8IWV8 1755 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 GCN1Q92616 2671 aaKnown RBP2.51□□□□□ -2.01
VPS8-228ENST00000628962 FLNBO75369 2602 aaKnown RBP2.51□□□□□ -2.01
VPS8-228ENST00000628962 SMIM28A0A1B0GU29 152 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 TUBAL3A6NHL2 446 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 A8MU10 97 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 SLC17A2O00624 439 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 SOCS3O14543 225 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 POLR1CO15160 346 aaPredicted RBP2.51□□□□□ -2.01
VPS8-228ENST00000628962 CLOCKO15516 846 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 UGT1A9O60656 530 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 SCRG1O75711 98 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 GPX5O75715 221 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 NOL4O94818 638 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 SLC2A10O95528 541 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 TIMP1P01033 207 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 STAG3L2P0CL84 134 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 GATA1P15976 413 aaPredicted RBP2.51□□□□□ -2.01
VPS8-228ENST00000628962 PTNP21246 168 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 GSTM3P21266 225 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 TUBG1P23258 451 aa2.51□□□□□ -2.01
VPS8-228ENST00000628962 GTF2E2P29084 291 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms