RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 P2RY8Q86VZ1 359 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 RFLNBQ8N5W9 214 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 ARIH2OSQ8N7S6 290 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 TMEM99Q8N816 258 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 OR14L1PQ8NHC6 308 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 RPL3LQ92901 407 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 MGLLQ99685 303 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 YIPF3Q9GZM5 350 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 TXNIPQ9H3M7 391 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 RPRD1BQ9NQG5 326 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 OSGIN2Q9Y236 505 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 TRAPPC4Q9Y296 219 aa8.49□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF407Q9C0G0 2248 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 GJE1A6NN92 205 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 C12orf71A8MTZ7 269 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 TRAPPC6AO75865 159 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 LALBAP00709 142 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 SBK2P0C263 348 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 CD36P16671 472 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 ACVR1BP36896 505 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 DAP3P51398 398 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 SLC25A1P53007 311 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 WNT4P56705 351 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 OR2B6P58173 313 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 RAC1P63000 192 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 MFAP5Q13361 173 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 GGTLC2Q14390 218 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 TMPPEQ6ZT21 453 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 YRDCQ86U90 279 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 LHFPL3Q86UP9 236 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 EGFL6Q8IUX8 553 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 ACBD7Q8N6N7 88 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 ADPRHL1Q8NDY3 354 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 FAM83FQ8NEG4 500 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 OR2M7Q8NG81 312 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 OR6K6Q8NGW6 343 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 ZMYND19Q96E35 227 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 BCL7BQ9BQE9 202 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 RNF32Q9H0A6 362 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 INPP5EQ9NRR6 644 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 ERVK13-1Q9NX77 482 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 B4GALT7Q9UBV7 327 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 KLF13Q9Y2Y9 288 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 MRPS18CQ9Y3D5 142 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 CSAG2Q9Y5P2 127 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 POLEQ07864 2286 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 DNAJC13O75165 2243 aa8.48□□□□□ -1.05
PDLIM5-223ENST00000627587 CELSR2Q9HCU4 2923 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 A0A1W2PNV4 684 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 NPIPB13A6NJU9 1138 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 NPIPB4C9JG80 1138 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 NPIPA5E9PKD4 350 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 H0YC42 278 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 SULT2B1O00204 365 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 ARHGEF9O43307 516 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 GLCEO94923 617 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 PMS2P2O95744 297 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 BCL10O95999 233 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 SP1P08047 785 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 MRPL3P09001 348 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 CD46P15529 392 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 TGFBR1P36897 503 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 RGS6P49758 472 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 DIO1P49895 249 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 ACTC1P68032 377 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 ACTA1P68133 377 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 SLC35A1P78382 337 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 ARG2P78540 354 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 H3F3AP84243 136 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 POU3F1Q03052 451 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 INAQ16352 499 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF239Q16600 458 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 SLC25A25Q6KCM7 469 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 FAM180AQ6UWF9 173 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 SSX6Q7RTT6 188 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 PXKQ7Z7A4 578 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 GGNQ86UU5 652 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 SULF2Q8IWU5 870 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 ALDH16A1Q8IZ83 802 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 OR6V1Q8N148 313 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 KLHL36Q8N4N3 616 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 POMGNT2Q8NAT1 580 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 OR2T4Q8NH00 348 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 SMPDL3BQ92485 455 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 SNX18Q96RF0 628 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 CNN2Q99439 309 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 OR2B2Q9GZK3 357 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.47□□□□□ -1.053e-8■■■□□ 14.8
PDLIM5-223ENST00000627587 SYT4Q9H2B2 425 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF703Q9H7S9 590 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 PTTG2Q9NZH5 202 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 NPIPA1Q9UND3 350 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 MOKQ9UQ07 419 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 KLF2Q9Y5W3 355 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 A0A1W2PPW3 197 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 DAPL1A0PJW8 107 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 PRSS37A4D1T9 235 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 A6NIZ1 184 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 KLRC4-KLRK1H3BQV0 150 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 CCRL2O00421 344 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms