RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 TMEM239Q8WW34 195 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 BCL2L2Q92843 193 aaPredicted RBP5.58□□□□□ -1.52
TCF4-249ENST00000625716 FAM162AQ96A26 154 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 DACT3Q96B18 629 aaPredicted RBP5.58□□□□□ -1.52
TCF4-249ENST00000625716 SGTBQ96EQ0 304 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 BOD1Q96IK1 185 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 LRR1Q96L50 414 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 SLC38A2Q96QD8 506 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 DHRS9Q9BPW9 319 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 KCTD14Q9BQ13 255 aaPredicted RBP5.58□□□□□ -1.52
TCF4-249ENST00000625716 EMC6Q9BV81 110 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 FNDC11Q9BVV2 318 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 ULBP2Q9BZM5 246 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 BARX1Q9HBU1 254 aaPredicted RBP5.58□□□□□ -1.52
TCF4-249ENST00000625716 CBLN4Q9NTU7 201 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 ZNF701Q9NV72 531 aaPredicted RBP5.58□□□□□ -1.52
TCF4-249ENST00000625716 MED29Q9NX70 200 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 CMTM6Q9NX76 183 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 ADA2Q9NZK5 511 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 B3GAT1Q9P2W7 334 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 USP22Q9UPT9 525 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 MOKQ9UQ07 419 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 MED31Q9Y3C7 131 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 PMF1-BGLAPU3KQ54 211 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 POLQO75417 2590 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 LRBAP50851 2863 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 HTR3EA5X5Y0 456 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 ZNF99A8MXY4 864 aaPredicted RBP5.57□□□□□ -1.52
TCF4-249ENST00000625716 E7EQL1 145 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 ATP6V1G2-DDX39BF2Z307 99 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 H7C1Q1 480 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 TRAF3IP2O43734 574 aaPredicted RBP5.57□□□□□ -1.52
TCF4-249ENST00000625716 SNX3O60493 162 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 DCTN3O75935 186 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 OR7A10O76100 309 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 ZNF432O94892 652 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 SERPINA1P01009 418 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 THY1P04216 161 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 CD79AP11912 226 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 IFNGR1P15260 489 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 CBR1P16152 277 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 FUT1P19526 365 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 PI3P19957 117 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 DRD4P21917 467 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 APOBEC3AP31941 199 aaPredicted RBP5.57□□□□□ -1.52
TCF4-249ENST00000625716 ARR3P36575 388 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 DAP3P51398 398 aaKnown RBP5.57□□□□□ -1.52
TCF4-249ENST00000625716 CLRN1P58418 232 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 ERVFRD-1P60508 538 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 PSME3P61289 254 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 TUBA1BP68363 451 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 TUBA4AP68366 448 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 MXRA7P84157 204 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 SLC25A3Q00325 362 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 SPOCK1Q08629 439 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 NPRL3Q12980 569 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 TAF11Q15544 211 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 CLEC12BQ2HXU8 276 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 PGGHGQ32M88 737 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 C3orf36Q3SXR2 165 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 IFI44LQ53G44 452 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 CLEC9AQ6UXN8 241 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 WDR88Q6ZMY6 472 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 ZNF813Q6ZN06 617 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 TUBA1AQ71U36 451 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 LINGO2Q7L985 606 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 NLRC3Q7RTR2 1065 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 NKAIN4Q8IVV8 208 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 TMEM123Q8N131 208 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 LRRC17Q8N6Y2 441 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 FAM169BQ8N8A8 192 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 IL17RDQ8NFM7 739 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 OR6X1Q8NH79 312 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 TMEM255BQ8WV15 326 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 GEMIN6Q8WXD5 167 aaKnown RBP5.57□□□□□ -1.52
TCF4-249ENST00000625716 ZNF566Q969W8 418 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 SLC25A44Q96H78 314 aaPredicted RBP5.57□□□□□ -1.52
TCF4-249ENST00000625716 TXNDC15Q96J42 360 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 PRRC1Q96M27 445 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 LRRC37BQ96QE4 947 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 PRSS27Q9BQR3 290 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 TRAF4Q9BUZ4 470 aaPredicted RBP5.57□□□□□ -1.52
TCF4-249ENST00000625716 KATNB1Q9BVA0 655 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 MYLK2Q9H1R3 596 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 SPAG4Q9NPE6 437 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 TAS2R5Q9NYW4 299 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 STX18Q9P2W9 335 aaKnown RBP5.57□□□□□ -1.52
TCF4-249ENST00000625716 RPS6KA6Q9UK32 745 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 ARL2BPQ9Y2Y0 163 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 FAM32AQ9Y421 112 aaKnown RBP5.57□□□□□ -1.52
TCF4-249ENST00000625716 SPEF1Q9Y4P9 236 aa5.57□□□□□ -1.52
TCF4-249ENST00000625716 IGHV1-18A0A0C4DH31 117 aa5.56□□□□□ -1.52
TCF4-249ENST00000625716 TRIM64A6NGJ6 449 aa5.56□□□□□ -1.52
TCF4-249ENST00000625716 TRIM64BA6NI03 449 aa5.56□□□□□ -1.52
TCF4-249ENST00000625716 OVOL3O00110 214 aa5.56□□□□□ -1.52
TCF4-249ENST00000625716 NME4O00746 187 aa5.56□□□□□ -1.52
TCF4-249ENST00000625716 SEC14L2O76054 403 aa5.56□□□□□ -1.52
TCF4-249ENST00000625716 UBL3O95164 117 aa5.56□□□□□ -1.52
TCF4-249ENST00000625716 LYPD3O95274 346 aa5.56□□□□□ -1.52
TCF4-249ENST00000625716 FARS2O95363 451 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms