RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 IGLV2-23P01705 113 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 SERPINB5P36952 375 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 ACTR3P61158 418 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 ACTA1P68133 377 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 ZNF92Q03936 586 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 PPIL2Q13356 520 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 CLINT1Q14677 625 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 TGFBIQ15582 683 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 ZNF691Q5VV52 312 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 FAM71E1Q6IPT2 247 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 IGFL3Q6UXB1 125 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 LYPD2Q6UXB3 125 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 STRADAQ7RTN6 431 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 PUSL1Q8N0Z8 303 aaKnown RBP2.6□□□□□ -1.99
CDKL5-207ENST00000624700 OR8J1Q8NGP2 316 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 RHEBL1Q8TAI7 183 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 FAM110BQ8TC76 370 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 SLC2A14Q8TDB8 520 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 STARD8Q92502 1023 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 TUBGCP3Q96CW5 907 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 DNAJC19Q96DA6 116 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 PIK3IP1Q96FE7 263 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 MED8Q96G25 268 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 TSNARE1Q96NA8 513 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 RARRES2Q99969 163 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 GABARAPL3Q9BY60 117 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 ILKAPQ9H0C8 392 aaPredicted RBP2.6□□□□□ -1.99
CDKL5-207ENST00000624700 PARP12Q9H0J9 701 aaKnown RBP2.6□□□□□ -1.99
CDKL5-207ENST00000624700 PATZ1Q9HBE1 687 aaKnown RBP2.6□□□□□ -1.99
CDKL5-207ENST00000624700 KLHL28Q9NXS3 571 aa2.6□□□□□ -1.99
CDKL5-207ENST00000624700 A0A1W2PPV9 198 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 PLAC8L1A1L4L8 177 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 ANKRD63C9JTQ0 380 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 MPHOSPH10O00566 681 aaKnown RBP2.59□□□□□ -1.99
CDKL5-207ENST00000624700 BET1O15155 118 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 ANGPTL7O43827 346 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 WISP3O95389 354 aaPredicted RBP2.59□□□□□ -1.99
CDKL5-207ENST00000624700 C1orf105O95561 183 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 RAB3DO95716 219 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 C6orf47O95873 294 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 SERPIND1P05546 499 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 CALM1P0DP23 149 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 CALM2P0DP24 149 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 CALM3P0DP25 149 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 TNNI1P19237 187 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 CNR1P21554 472 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 FOXN2P32314 431 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 CYB561P49447 251 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 ZNF136P52737 540 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 KRTAP10-1P60331 282 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 BST1Q10588 318 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 DEFB116Q30KQ4 102 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 VPS26BQ4G0F5 336 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 UQCC3Q6UW78 93 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 C19orf35Q6ZS72 473 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 TAS2R42Q7RTR8 314 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 HDDC2Q7Z4H3 204 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 LIX1Q8N485 282 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 OR2L3Q8NG85 312 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 CXorf40AQ8TE69 158 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 ZFP90Q8TF47 636 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 SHC3Q92529 594 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 FBXO32Q969P5 355 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 PLIN2Q99541 437 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 P2RX4Q99571 388 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 SLC7A8Q9UHI5 535 aa2.59□□□□□ -1.99
CDKL5-207ENST00000624700 USP47Q96K76 1375 aa2.59□□□□□ -2
CDKL5-207ENST00000624700 IGKV1D-13A0A0B4J2D9 117 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 KIR2DL5BA0A0G2JN68 375 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 KIR2DL5BA0A0G2JPC4 375 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 ZNF726A6NNF4 738 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 ZNF324O75467 553 aaPredicted RBP2.58□□□□□ -2
CDKL5-207ENST00000624700 IGKV1-13P0DP09 117 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 TROVE2P10155 538 aaKnown RBP eCLIP2.58□□□□□ -2
CDKL5-207ENST00000624700 ZNF30P17039 623 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 IGFBP3P17936 291 aaPredicted RBP2.58□□□□□ -2
CDKL5-207ENST00000624700 TNNT2P45379 298 aaPredicted RBP2.58□□□□□ -2
CDKL5-207ENST00000624700 SSR4P51571 173 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 TPMTP51580 245 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 GPX6P59796 221 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 PLP1P60201 277 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 EBI3Q14213 229 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 RSPO1Q2MKA7 263 aaPredicted RBP2.58□□□□□ -2
CDKL5-207ENST00000624700 THEM4Q5T1C6 240 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 CCNJQ5T5M9 372 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 KHDRBS2Q5VWX1 349 aaKnown RBP2.58□□□□□ -2
CDKL5-207ENST00000624700 C12orf56Q8IXR9 622 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 KIR2DL5AQ8N109 375 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 OR4S2Q8NH73 311 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 KIR2DL5BQ8NHK3 375 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 TMEM54Q969K7 222 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 C12orf42Q96LP6 360 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 LZTS2Q9BRK4 669 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 HPCAL4Q9UM19 191 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 ASB3Q9Y575 518 aa2.58□□□□□ -2
CDKL5-207ENST00000624700 F11RQ9Y624 299 aaKnown RBP2.58□□□□□ -2
CDKL5-207ENST00000624700 IGHV3-66A0A0C4DH42 116 aa2.57□□□□□ -2
CDKL5-207ENST00000624700 ARHGEF35A5YM69 484 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms