RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 VASPP50552 380 aaPredicted RBP13.83□□□□□ -0.2
PMS1-221ENST00000624204 F2RL1P55085 397 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 ZNF658BQ4V348 819 aaPredicted RBP13.83□□□□□ -0.2
PMS1-221ENST00000624204 ATPAF1Q5TC12 328 aaPredicted RBP13.83□□□□□ -0.2
PMS1-221ENST00000624204 LIPNQ5VXI9 398 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 NKAIN2Q5VXU1 208 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 TMEM205Q6UW68 189 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 SEMA6DQ8NFY4 1073 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 ZPLD1Q8TCW7 415 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 TRMT2BQ96GJ1 504 aaKnown RBP13.83□□□□□ -0.2
PMS1-221ENST00000624204 NRIP2Q9BQI9 281 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 SRA1Q9HD15 236 aaKnown RBP13.83□□□□□ -0.2
PMS1-221ENST00000624204 ABT1Q9ULW3 272 aaKnown RBP13.83□□□□□ -0.2
PMS1-221ENST00000624204 TCF20Q9UGU0 1960 aaKnown RBP13.83□□□□□ -0.2
PMS1-221ENST00000624204 MED19A0JLT2 244 aaPredicted RBP13.83□□□□□ -0.2
PMS1-221ENST00000624204 IGHV2-70P01814 119 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 ITGB2P05107 769 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 MUC1P15941 1255 aaPredicted RBP13.83□□□□□ -0.2
PMS1-221ENST00000624204 PRKCZQ05513 592 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 ZNF813Q6ZN06 617 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 AMZ2Q86W34 360 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 CLEC1AQ8NC01 280 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 ZNF764Q96H86 408 aaPredicted RBP13.83□□□□□ -0.2
PMS1-221ENST00000624204 SDF2Q99470 211 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 RSPH9Q9H1X1 276 aaPredicted RBP13.83□□□□□ -0.2
PMS1-221ENST00000624204 RHOFQ9HBH0 211 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 SLC23A2Q9UGH3 650 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 IL36AQ9UHA7 158 aa13.83□□□□□ -0.2
PMS1-221ENST00000624204 A0A0A6YYC8 382 aaPredicted RBP13.82□□□□□ -0.2
PMS1-221ENST00000624204 PMS2P1A4D2B8 440 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 MCIDASD6RGH6 385 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 I3L1I5 382 aaPredicted RBP13.82□□□□□ -0.2
PMS1-221ENST00000624204 CLEC3AO75596 197 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 BCL6P41182 706 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 PGDP52209 483 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 EEF1A1P68104 462 aaKnown RBP13.82□□□□□ -0.2
PMS1-221ENST00000624204 BAP18Q8IXM2 172 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 OR51A4Q8NGJ6 313 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 OR2L2Q8NH16 312 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 DTD2Q96FN9 168 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 LAT2Q9GZY6 243 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 ATG2BQ96BY7 2078 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 UBE2CO00762 179 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 SFTA3P0C7M3 94 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 AKR1C4P17516 323 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 SNRPNP63162 240 aaKnown RBP13.82□□□□□ -0.2
PMS1-221ENST00000624204 IRF4Q15306 451 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 ANKRD16Q6P6B7 361 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 PARS2Q7L3T8 475 aaKnown RBP13.82□□□□□ -0.2
PMS1-221ENST00000624204 C12orf40Q86WS4 652 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 BPIFB2Q8N4F0 458 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 ASB13Q8WXK3 278 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 RASD2Q96D21 266 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 TCEAL7Q9BRU2 100 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 ZNF350Q9GZX5 532 aa13.82□□□□□ -0.2
PMS1-221ENST00000624204 LEFTY2O00292 366 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 NRG2O14511 850 aaPredicted RBP13.81□□□□□ -0.2
PMS1-221ENST00000624204 PQBP1O60828 265 aaKnown RBP13.81□□□□□ -0.2
PMS1-221ENST00000624204 GPANK1O95872 356 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 ITGA3P26006 1051 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 BTN3A2P78410 334 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 PJVKQ0ZLH3 352 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 RNF212Q495C1 297 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 PDZD11Q5EBL8 140 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 FAM76BQ5HYJ3 339 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 TPGS2Q68CL5 300 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 OR52W1Q6IF63 320 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 OR4K17Q8NGC6 315 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 MS4A6EQ96DS6 147 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 MMP26Q9NRE1 261 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 KLF15Q9UIH9 416 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 COL4A3Q01955 1670 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 DENND4CQ5VZ89 1909 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 ELOA3DA6NLF2 546 aaPredicted RBP13.81□□□□□ -0.2
PMS1-221ENST00000624204 BLOC1S5-TXNDC5H3BN57 136 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 WNT11O96014 354 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 CYB5AP00167 134 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 RNF224P0DH78 156 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 SLC25A4P12235 298 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 CD80P33681 288 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 PBX2P40425 430 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 RBM34P42696 430 aaKnown RBP13.81□□□□□ -0.2
PMS1-221ENST00000624204 TAS2R19P59542 299 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 ACTBP60709 375 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 ACTG1P63261 375 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 ELOA3BQ3SY89 546 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 VWA2Q5GFL6 755 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 ABHD17CQ6PCB6 329 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 LINC01555Q8NAE3 123 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 ELOA3Q8NG57 546 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 OR4S1Q8NGB4 309 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 NUS1Q96E22 293 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 PIK3IP1Q96FE7 263 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 ADAD1Q96M93 576 aaKnown RBP13.81□□□□□ -0.2
PMS1-221ENST00000624204 SEMA6CQ9H3T2 930 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 RCC2Q9P258 522 aaKnown RBP13.81□□□□□ -0.2
PMS1-221ENST00000624204 DTX4Q9Y2E6 619 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 CSAG2Q9Y5P2 127 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 FITM1A5D6W6 292 aa13.81□□□□□ -0.2
PMS1-221ENST00000624204 LRRC72A6NJI9 287 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms