RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 TRPM6Q9BX84 2022 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 OR6C76A6NM76 312 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 OR4C45A6NMZ5 311 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 ACTL6AO96019 429 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 GLAP06280 429 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 ADH5P11766 374 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 TLX1P31314 330 aaPredicted RBP12.82□□□□□ -0.36
LDB3-209ENST00000623056 SSBP1Q04837 148 aaKnown RBP12.82□□□□□ -0.36
LDB3-209ENST00000623056 ODF4Q2M2E3 257 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 VWA2Q5GFL6 755 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 LIN54Q6MZP7 749 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 H3F3CQ6NXT2 135 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 TMEM71Q6P5X7 295 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 GALNT16Q8N428 558 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 ZNF676Q8N7Q3 588 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 DMBX1Q8NFW5 382 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 SFT2D1Q8WV19 159 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 SLC25A21Q9BQT8 299 aaPredicted RBP12.82□□□□□ -0.36
LDB3-209ENST00000623056 PTDSS2Q9BVG9 487 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 ULBP3Q9BZM4 244 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 CAPN10Q9HC96 672 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 DAPP1Q9UN19 280 aa12.82□□□□□ -0.36
LDB3-209ENST00000623056 NOP16Q9Y3C1 178 aaKnown RBP12.82□□□□□ -0.36
LDB3-209ENST00000623056 CDH23Q9H251 3354 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 A0A087WV62 115 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 SULT2B1O00204 365 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 FGF16O43320 207 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 CDC40O60508 579 aaKnown RBP eCLIP12.81□□□□□ -0.36
LDB3-209ENST00000623056 AK1P00568 194 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 F12P00748 615 aaPredicted RBP12.81□□□□□ -0.36
LDB3-209ENST00000623056 AMY2AP04746 511 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 IFNA4P05014 189 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 CRYBA1P05813 215 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 ITGA5P08648 1049 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 FBXO45P0C2W1 286 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 MAP3K8P41279 467 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 CDKN2AP42771 156 aaKnown RBP12.81□□□□□ -0.36
LDB3-209ENST00000623056 SRSF3P84103 164 aaKnown RBP12.81□□□□□ -0.36
LDB3-209ENST00000623056 HYAL4Q2M3T9 481 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 C2orf76Q3KRA6 126 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 ULK3Q6PHR2 472 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 TMEM205Q6UW68 189 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 ZNF813Q6ZN06 617 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 OR1J4Q8NGS1 313 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 ING5Q8WYH8 240 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 TEX101Q9BY14 249 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 TLNRD1Q9H1K6 362 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 ATG5Q9H1Y0 275 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 MYOZ1Q9NP98 299 aaPredicted RBP12.81□□□□□ -0.36
LDB3-209ENST00000623056 IKZF2Q9UKS7 526 aa12.81□□□□□ -0.36
LDB3-209ENST00000623056 ZNF860A6NHJ4 632 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 OR2AT4A6NND4 320 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 FADS1O60427 444 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 EIF3GO75821 320 aaKnown RBP eCLIP12.8□□□□□ -0.36
LDB3-209ENST00000623056 AKR7A3O95154 331 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 NPBWR1P48145 328 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 CAPZA1P52907 286 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 AVPI1Q5T686 147 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 ARHGAP40Q5TG30 622 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 UNQ6126/PRO20091Q6UXV3 157 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 PGAP1Q75T13 922 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 ZFP82Q8N141 532 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 TMEM229BQ8NBD8 167 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 OR2G2Q8NGZ5 317 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 PMM1Q92871 262 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 SMARCD2Q92925 531 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 FAM3DQ96BQ1 224 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 SEH1LQ96EE3 360 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 SERINC2Q96SA4 455 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 ZFP57Q9NU63 452 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 DOCK9Q9BZ29 2069 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 LINC00587B1AMM8 73 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 C1QTNF3-AMACRE9PGA6 284 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 B3GALT2O43825 422 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 ALOX12BO75342 701 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 ZNF432O94892 652 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 TIMP1P01033 207 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 CT62P0C5K7 136 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 INPP5JQ15735 1006 aaPredicted RBP12.8□□□□□ -0.36
LDB3-209ENST00000623056 RAB11BQ15907 218 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 SWI5Q1ZZU3 235 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 IGSF11Q5DX21 431 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 SFTPA1Q8IWL2 248 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 RXFP4Q8TDU9 374 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 GPR148Q8TDV2 347 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 PAQR8Q8TEZ7 354 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 COMMD4Q9H0A8 199 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 ZDHHC4Q9NPG8 344 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 SLC22A7Q9Y694 548 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 NUP210LQ5VU65 1888 aa12.8□□□□□ -0.36
LDB3-209ENST00000623056 LOC100289279A0A1B0GTE1 492 aa12.79□□□□□ -0.36
LDB3-209ENST00000623056 P2RX6O15547 441 aa12.79□□□□□ -0.36
LDB3-209ENST00000623056 FGF17O60258 216 aa12.79□□□□□ -0.36
LDB3-209ENST00000623056 SNAPINO95295 136 aa12.79□□□□□ -0.36
LDB3-209ENST00000623056 HLA-AP01891 365 aaKnown RBP12.79□□□□□ -0.36
LDB3-209ENST00000623056 RHOP08100 348 aa12.79□□□□□ -0.36
LDB3-209ENST00000623056 ACAA1P09110 424 aaPredicted RBP12.79□□□□□ -0.36
LDB3-209ENST00000623056 LIPCP11150 499 aa12.79□□□□□ -0.36
LDB3-209ENST00000623056 CFPP27918 469 aa12.79□□□□□ -0.36
LDB3-209ENST00000623056 PNLIPRP2P54317 469 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms