RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 GSG1Q2KHT4 349 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 FAM98BQ52LJ0 330 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 ARMC4Q5T2S8 1044 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 LCN8Q6JVE9 175 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 LRFN4Q6PJG9 635 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 PIWIL3Q7Z3Z3 882 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 MDP1Q86V88 176 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 FBXL14Q8N1E6 418 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 MCHR2Q969V1 340 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 DHRS1Q96LJ7 313 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 KATNB1Q9BVA0 655 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 GRHPRQ9UBQ7 328 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 ZNF346Q9UL40 294 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 MOKQ9UQ07 419 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 ARID1AO14497 2285 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 CELSR1Q9NYQ6 3014 aa12.18□□□□□ -0.46
PCDHGC3-208ENST00000622836 RAI1Q7Z5J4 1906 aaPredicted RBP12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 SH3PXD2BA1X283 911 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 UNC119BA6NIH7 251 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 A6NIZ1 184 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 NPIPB13A6NJU9 1138 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 NPIPB4C9JG80 1138 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 XKRYO14609 159 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 UBL3O95164 117 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 NDUFB2O95178 105 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 RAB36O95755 333 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 SOD3P08294 240 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 CECR9P0C854 216 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 OR8G3PP0DMU2 310 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 CBR1P16152 277 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 OMPP47874 163 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 PTDSS1P48651 473 aaKnown RBP12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 RAP1BP61224 184 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 RAP1AP62834 184 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 MS4A2Q01362 244 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 PGGHGQ32M88 737 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 C3orf36Q3SXR2 165 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 IQCCQ4KMZ1 466 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 AGAP6Q5VW22 663 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 FAM205BPQ63HN1 556 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 SLC22A24Q8N4F4 322 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 NSMAFQ92636 917 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 HDAC2Q92769 488 aaKnown RBP12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 POP5Q969H6 163 aaKnown RBP12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 RSRC1Q96IZ7 334 aaKnown RBP12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 TSPAN32Q96QS1 320 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 RBP7Q96R05 134 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 DHRS9Q9BPW9 319 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 MRPL13Q9BYD1 178 aaKnown RBP12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 RNF121Q9H920 327 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 TMEM38BQ9NVV0 291 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 ITPR3Q14573 2671 aa12.17□□□□□ -0.46
PCDHGC3-208ENST00000622836 F8P00451 2351 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 PLCE1Q9P212 2302 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 TCRBV5S2A0A599 114 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 ZNF503-AS2A6NEH8 195 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 E7EQL1 145 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 TNFRSF11BO00300 401 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 TMCC2O75069 709 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 KRT36O76013 467 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 SLC2A10O95528 541 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 IGKV3-15P01624 115 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 IGHMP01871 453 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 CELA3BP08861 270 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 DANCRP0C864 163 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 GUCA1AP43080 201 aaPredicted RBP12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 LIMS1P48059 325 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 PTH2RP49190 550 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 ATP5J2P56134 94 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 NAAAQ02083 359 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 FMODQ06828 376 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 HIST3H3Q16695 136 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 Q5PR19 223 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 B3GLCTQ6Y288 498 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 ZNF627Q7L945 461 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 LRRC75A-AS1Q8N1F1 130 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 MUC15Q8N387 334 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 FAM169BQ8N8A8 192 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 LRRC75AQ8NAA5 344 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 FNDC8Q8TC99 324 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 TRMT61AQ96FX7 289 aaKnown RBP12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 ZNF570Q96NI8 536 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 SH3GL3Q99963 347 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 BTBD10Q9BSF8 475 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 ALG12Q9BV10 488 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 MAGIXQ9H6Y5 334 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 CRNNQ9UBG3 495 aaPredicted RBP12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 IL20RAQ9UHF4 553 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 USF3Q68DE3 2245 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 AKAP9Q99996 3911 aa12.16□□□□□ -0.46
PCDHGC3-208ENST00000622836 IGLV1-44P01699 117 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 CD14P08571 375 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 TTKP33981 857 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 CDKN1AP38936 164 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 GIPRP48546 466 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 RASSF2P50749 326 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 RAB1AP62820 205 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 ADAM8P78325 824 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 TRAP1Q12931 704 aaKnown RBP12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 FHL1Q13642 323 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms