RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	OR6N1	Q8NGY5	312 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	MEX3A	A1L020	520 aa	Known RBP	13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	FGF17	O60258	216 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	CTNS	O60931	367 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	MRPS10	P82664	201 aa	Known RBP	13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	PDGFRL	Q15198	375 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	AGBL4	Q5VU57	503 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	OR10AC1	Q8NH08	325 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	CAPNS2	Q96L46	248 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	TRIM2	Q9C040	744 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	ZFP57	Q9NU63	452 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	TMEM74B	Q9NUR3	256 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	GON4L	Q3T8J9	2241 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	TRAV8-7	A0A075B6U6	113 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	BLOC1S5-TXNDC5	H3BN57	136 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	BCL2L11	O43521	198 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	LYPD3	O95274	346 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	AKAIN1	P0CW23	69 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	RPS27	P42677	84 aa	Known RBP	13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	FBXO42	Q6P3S6	717 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	SHISA5	Q8N114	240 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	KCNRG	Q8N5I3	272 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	OR5T3	Q8NGG3	340 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	ADAD1	Q96M93	576 aa	Known RBP	13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	GPN3	Q9UHW5	284 aa	Predicted RBP	13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	FBXL21	Q9UKT6	434 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	TBC1D3D	A0A087WVF3	549 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	TBC1D3I	A0A087WXS9	549 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045		A0A0B4J2E0	115 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045		A0A1B0GX12	115 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045		A0A1W2PQU0	124 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	TMEM82	A0PJX8	343 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	RAB19	A4D1S5	217 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	TBC1D3L	B9A6J9	549 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	ICOSLG	O75144	302 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	TBC1D3H	P0C7X1	549 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	AQP2	P41181	271 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	CAPZA1	P52907	286 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	NKPD1	Q17RQ9	610 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	TBC1D3C	Q6IPX1	549 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	UNQ9370/PRO34162	Q6UXP9	181 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	OR10R2	Q8NGX6	335 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	PPP1R1C	Q8WVI7	109 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	RERG	Q96A58	199 aa	Predicted RBP	13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	RASD2	Q96D21	266 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	HHIPL1	Q96JK4	782 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	TSSK2	Q96PF2	358 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	LMF1	Q96S06	567 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	P2RX6	O15547	441 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	S100A6	P06703	90 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	NGFR	P08138	427 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	MAPK3	P27361	379 aa	Predicted RBP	13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	AGTR1	P30556	359 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	DIO1	P49895	249 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	SMCO1	Q147U7	214 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	NNAT	Q16517	81 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	STEAP1B	Q6NZ63	245 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	ETV3L	Q6ZN32	361 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	TOX2	Q96NM4	488 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	HEBP2	Q9Y5Z4	205 aa		13.09	□□□□□ -0.31
SYNRG-231	ENST00000622045	F5	P12259	2224 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	EMD	P50402	254 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	MECP2	P51608	486 aa	Known RBP	13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	PSMD4	P55036	377 aa	Known RBP	13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	ZNHIT3	Q15649	155 aa	Predicted RBP	13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	PRAMEF17	Q5VTA0	474 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	RHOU	Q7L0Q8	258 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	ABHD13	Q7L211	337 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	PHOSPHO1	Q8TCT1	267 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	TBC1D29	Q9UFV1	150 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	STEAP1	Q9UHE8	339 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	CPED1	A4D0V7	1026 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	AGPAT2	O15120	278 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	BRINP1	O60477	761 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	AMY2A	P04746	511 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	CSF1	P09603	554 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	CD34	P28906	385 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	ILF3	Q12906	894 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	PRSS41	Q7RTY9	318 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	FAM122B	Q7Z309	247 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	CASTOR1	Q8WTX7	329 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	FGF13	Q92913	245 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	TCEAL3	Q969E4	200 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	CMTM3	Q96MX0	182 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	CNTNAP3B	Q96NU0	1288 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	SPSB2	Q99619	263 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	GAREM1	Q9H706	876 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	MBD2	Q9UBB5	411 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	MIOX	Q9UGB7	285 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	SLC22A7	Q9Y694	548 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	SPI1	P17947	270 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	PNLIPRP2	P54317	469 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	FAM78A	Q5JUQ0	283 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	KCTD9	Q7L273	389 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms