RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 AMELYQ99218 206 aa8.52□□□□□ -1.05
PDPN-212ENST00000621990 COMMD4Q9H0A8 199 aa8.52□□□□□ -1.05
PDPN-212ENST00000621990 TXNIPQ9H3M7 391 aa8.52□□□□□ -1.05
PDPN-212ENST00000621990 ZNF768Q9H5H4 540 aaKnown RBP8.52□□□□□ -1.05
PDPN-212ENST00000621990 RANBP3Q9H6Z4 567 aaPredicted RBP8.52□□□□□ -1.05
PDPN-212ENST00000621990 B9D1Q9UPM9 204 aa8.52□□□□□ -1.05
PDPN-212ENST00000621990 MRPS17Q9Y2R5 130 aaKnown RBP8.52□□□□□ -1.05
PDPN-212ENST00000621990 SPAG17Q6Q759 2223 aa8.52□□□□□ -1.05
PDPN-212ENST00000621990 TRAV8-7A0A075B6U6 113 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 TMED7-TICAM2A0A0A6YYA0 188 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 XKRYO14609 159 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 PEX14O75381 377 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 SLC25A12O75746 678 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 KRT33AO76009 404 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 TGM6O95932 706 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 CXCL3P19876 107 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 ITPKBP27987 946 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 KIR3DL2P43630 455 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 CSNK1EP49674 416 aaKnown RBP8.51□□□□□ -1.05
PDPN-212ENST00000621990 MECP2P51608 486 aaKnown RBP8.51□□□□□ -1.05
PDPN-212ENST00000621990 ART1P52961 327 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 CLDN12P56749 244 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 RPS15P62841 145 aaKnown RBP8.51□□□□□ -1.05
PDPN-212ENST00000621990 ACKR1Q16570 336 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 ST3GAL2Q16842 350 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 TMEM255AQ5JRV8 349 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 TMEM69Q5SWH9 247 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 ARHGAP40Q5TG30 622 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 CHRDL2Q6WN34 429 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 COX15Q7KZN9 410 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 MISPQ8IVT2 679 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 SIX5Q8N196 739 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 SLC25A45Q8N413 288 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 OR6S1Q8NH40 331 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 CEP76Q8TAP6 659 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 FCAMRQ8WWV6 532 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 GPR137Q96N19 417 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 ELF4Q99607 663 aaPredicted RBP8.51□□□□□ -1.05
PDPN-212ENST00000621990 UTP23Q9BRU9 249 aaKnown RBP8.51□□□□□ -1.05
PDPN-212ENST00000621990 SEMA4CQ9C0C4 833 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 TTYH1Q9H313 450 aaPredicted RBP8.51□□□□□ -1.05
PDPN-212ENST00000621990 KCNG2Q9UJ96 466 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 IKZF2Q9UKS7 526 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 FBXL3Q9UKT7 428 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 MKL2Q9ULH7 1088 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 ING4Q9UNL4 249 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 RCE1Q9Y256 329 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 TMED7Q9Y3B3 224 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 HSPB11Q9Y547 144 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 SEC16AO15027 2179 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 PCNX3Q9H6A9 2034 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 IGLV3-12A0A075B6K2 115 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 A0A1B0GTH9 108 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 A0A1B0GVI7 797 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 PLPP3O14495 311 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 TPD52L2O43399 206 aaKnown RBP8.51□□□□□ -1.05
PDPN-212ENST00000621990 GMDSO60547 372 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 PRAF2O60831 178 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 CDK2P24941 298 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 STARD6P59095 220 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 INSM1Q01101 510 aaPredicted RBP8.51□□□□□ -1.05
PDPN-212ENST00000621990 WDR38Q5JTN6 314 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 C1orf140Q5VVS0 124 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 MTFR2Q6P444 385 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 METTL21AQ8WXB1 218 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 C8orf44Q96CB5 159 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 MRPL22Q9NWU5 206 aaKnown RBP8.51□□□□□ -1.05
PDPN-212ENST00000621990 STEAP1Q9UHE8 339 aa8.51□□□□□ -1.05
PDPN-212ENST00000621990 FTCDNL1E5RQL4 147 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 ACOT7O00154 380 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 TOX3O15405 576 aaPredicted RBP8.5□□□□□ -1.05
PDPN-212ENST00000621990 GPANK1O95872 356 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 CD37P11049 281 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 PSMB1P20618 241 aaKnown RBP8.5□□□□□ -1.05
PDPN-212ENST00000621990 AFF3P51826 1226 aaKnown RBP8.5□□□□□ -1.05
PDPN-212ENST00000621990 IKZF1Q13422 519 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 SLC17A1Q14916 467 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 UBXN2BQ14CS0 331 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 SMAD2Q15796 467 aaKnown RBP8.5□□□□□ -1.05
PDPN-212ENST00000621990 ZNF679Q8IYX0 411 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 ZNF676Q8N7Q3 588 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 OR51A4Q8NGJ6 313 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 OR10AC1Q8NH08 325 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 RNF128Q8TEB7 428 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 THEM6Q8WUY1 208 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 TMEM106AQ96A25 262 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 PHF21AQ96BD5 680 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 MS4A3Q96HJ5 214 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 SLX1AQ9BQ83 275 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 SLC22A11Q9NSA0 550 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 CTSFQ9UBX1 484 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 PPIEQ9UNP9 301 aaKnown RBP8.5□□□□□ -1.05
PDPN-212ENST00000621990 ABCA7Q8IZY2 2146 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 A0A1B0GUH1 482 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 SLC22A23A1A5C7 686 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 ERVH48-1M5A8F1 160 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 XRCC3O43542 346 aa8.5□□□□□ -1.05
PDPN-212ENST00000621990 GLSO94925 669 aaPredicted RBP8.5□□□□□ -1.05
PDPN-212ENST00000621990 RPS27P42677 84 aaKnown RBP8.5□□□□□ -1.05
PDPN-212ENST00000621990 SOX2P48431 317 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms