RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 C17orf50Q8WW18 174 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 HMGB4Q8WW32 186 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 RAB40AQ8WXH6 277 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 KTI12Q96EK9 354 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 MRPL48Q96GC5 212 aaKnown RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 MED30Q96HR3 178 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 RADILQ96JH8 1075 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 ZC3H10Q96K80 434 aaKnown RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 ZFP3Q96NJ6 502 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 SLC46A1Q96NT5 459 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 DGAT2Q96PD7 388 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 OR1F2PQ96R84 312 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 MNTQ99583 582 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 ELF4Q99607 663 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 SMAD5Q99717 465 aaKnown RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 CCDC3Q9BQI4 270 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 SEC22CQ9BRL7 303 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 PELOQ9BRX2 385 aaKnown RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 MRI1Q9BV20 369 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 TMEM106CQ9BVX2 250 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 NUDT9Q9BW91 350 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 TMPRSS13Q9BYE2 586 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 ACTR6Q9GZN1 396 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 SPRTNQ9H040 489 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 CDCP1Q9H5V8 836 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 RANBP3Q9H6Z4 567 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 C8orf33Q9H7E9 229 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 WDR76Q9H967 626 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 LIN7BQ9HAP6 207 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 BEX1Q9HBH7 125 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 CAPN10Q9HC96 672 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 RXFP3Q9NSD7 469 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 UCKL1Q9NWZ5 548 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 TAS2R5Q9NYW4 299 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 VSX1Q9NZR4 365 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 MRPL15Q9P015 296 aaKnown RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 FRRS1LQ9P0K9 344 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 SEMA5BQ9P283 1151 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 KLHL9Q9P2J3 617 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 MGAT4CQ9UBM8 478 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 KLK11Q9UBX7 282 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 MTFP1Q9UDX5 166 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 KCNG2Q9UJ96 466 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 SCP2D1Q9UJQ7 156 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 CYP8B1Q9UNU6 501 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 MRPS33Q9Y291 106 aaKnown RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 MMACHCQ9Y4U1 282 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 PCDHGA5Q9Y5G8 931 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 V9GY05 133 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 DOCK11Q5JSL3 2073 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 INTS1Q8N201 2190 aaKnown RBP2.91□□□□□ -1.94
U1.39-201ENST00000621562 TRAV36DV7A0A075B6V5 113 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 TRAV14DV4A0A0A6YYC5 116 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 ARPC4-TTLL3A0A0A6YYG9 625 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 A0A1B0GTI1 187 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 LOC105371267A0A1B0GV96 52 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 A0A1W2PPC1 479 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 LOC390937A0A1W2PQ73 354 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 SLC22A23A1A5C7 686 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 PRSS37A4D1T9 235 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 GGT3PA6NGU5 568 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 TMEM212A6NML5 194 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 SNRPGP15A8MWD9 76 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 C17orf105B2RV13 164 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 ALG1L2C9J202 215 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 PYCARD-AS1I3L0S3 204 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 ACOT7O00154 380 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 MEN1O00255 615 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 ETV2O00321 342 aaPredicted RBP2.91□□□□□ -1.94
U1.39-201ENST00000621562 SLC17A2O00624 439 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 ZNF264O43296 627 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 XRCC3O43542 346 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 CDC40O60508 579 aaKnown RBP eCLIP2.91□□□□□ -1.94
U1.39-201ENST00000621562 EIF4E2O60573 245 aaKnown RBP2.91□□□□□ -1.94
U1.39-201ENST00000621562 ZNF354AO60765 605 aaPredicted RBP2.91□□□□□ -1.94
U1.39-201ENST00000621562 CTAG2O75638 210 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 B3GALNT1O75752 331 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 DXOO77932 396 aaKnown RBP2.91□□□□□ -1.94
U1.39-201ENST00000621562 ZNF432O94892 652 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 RPP14O95059 124 aaKnown RBP2.91□□□□□ -1.94
U1.39-201ENST00000621562 CRYZL1O95825 349 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 ECDO95905 644 aaPredicted RBP2.91□□□□□ -1.94
U1.39-201ENST00000621562 PNPP00491 289 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 ITGB2P05107 769 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 F13BP05160 661 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 MELTFP08582 738 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 ITGA5P08648 1049 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 ZNF735P0CB33 412 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 RRASP10301 218 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 IFNGR1P15260 489 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 CTLA4P16410 223 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 ANXA7P20073 488 aaKnown RBP2.91□□□□□ -1.94
U1.39-201ENST00000621562 POU3F2P20265 443 aaPredicted RBP2.91□□□□□ -1.94
U1.39-201ENST00000621562 IL11P20809 199 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 ANOS1P23352 680 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 MAPK3P27361 379 aaPredicted RBP2.91□□□□□ -1.94
U1.39-201ENST00000621562 ITPKBP27987 946 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 CD1CP29017 333 aa2.91□□□□□ -1.94
U1.39-201ENST00000621562 TACR3P29371 465 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms