RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 SLC7A13Q8TCU3 470 aa15.43■□□□□ 0.06
TRAPPC3-209ENST00000616395 HDAC2Q92769 488 aaKnown RBP15.43■□□□□ 0.06
TRAPPC3-209ENST00000616395 UBAP1Q9NZ09 502 aa15.43■□□□□ 0.06
TRAPPC3-209ENST00000616395 A0A087WXM4 84 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 IGLV3-32A0A0A0MS00 114 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 H3BN98 237 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 FRS3O43559 492 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 CHP2O43745 196 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 GASTP01350 101 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 LINGO3P0C6S8 592 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 ZNF17P17021 662 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 NR4A2P43354 598 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 CRISP1P54107 249 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 ZNF117Q03924 483 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 C17orf67Q0P5P2 114 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 C1orf94Q6P1W5 598 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 CASP12Q6UXS9 341 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 ESPNLQ6ZVH7 1005 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 TMCO5AQ8N6Q1 288 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 LSMEM1Q8N8F7 131 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 TSPAN14Q8NG11 270 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 RNF128Q8TEB7 428 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 OSTF1Q92882 214 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 RADILQ96JH8 1075 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 HRASLS5Q96KN8 279 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 TMEM185BQ9H7F4 350 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 CTPS2Q9NRF8 586 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 KLHL13Q9P2N7 655 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 POU2F3Q9UKI9 436 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 SLC7A7Q9UM01 511 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 TPRKBQ9Y3C4 175 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 MED31Q9Y3C7 131 aa15.42■□□□□ 0.06
TRAPPC3-209ENST00000616395 IGHV4-61A0A0C4DH41 118 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 ZNF814B7Z6K7 855 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 MITFO75030 526 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 LYZL6O75951 148 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 VENTXO95231 258 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 CLPTM1O96005 669 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 PNMTP11086 282 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 EEF1B2P24534 225 aaKnown RBP15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 SRP14P37108 136 aaKnown RBP15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 FABP6P51161 128 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 TUBA4AP68366 448 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 SPOCK1Q08629 439 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 TSPAN31Q12999 210 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 RPL13AP3Q6NVV1 102 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 PGBD2Q6P3X8 592 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 SLC22A25Q6T423 547 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 B3GLCTQ6Y288 498 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 TEX47Q8TBZ9 253 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 CNOT9Q92600 299 aaKnown RBP15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 MUCL1Q96DR8 90 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 PITX2Q99697 317 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 SOX7Q9BT81 388 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 NDEL1Q9GZM8 345 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 NDUFA13Q9P0J0 144 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 KCNE5Q9UJ90 142 aa15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 NDRG4Q9ULP0 352 aaKnown RBP15.41■□□□□ 0.06
TRAPPC3-209ENST00000616395 CLDN24A6NM45 220 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 GKN3PP0CG01 181 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 PGCP20142 388 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 POU1F1P28069 291 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 GGT2P36268 569 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 PDLIM4P50479 330 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 CXCR4P61073 352 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 RAC1P63000 192 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 MYBPC1Q00872 1141 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 TEKQ02763 1124 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 ALG10BQ5I7T1 473 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 WBP2NLQ6ICG8 309 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 ZNF770Q6IQ21 691 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 CBLN3Q6UW01 205 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 CADM2Q8N3J6 435 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 GTPBP8Q8N3Z3 284 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 ZNF563Q8TA94 476 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 TMEM239Q8WW34 195 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 Q96MT0 163 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 NIPSNAP1Q9BPW8 284 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 FUZQ9BT04 418 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 LAT2Q9GZY6 243 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 CCNB1IP1Q9NPC3 277 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 CARD8Q9Y2G2 431 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 CHST2Q9Y4C5 530 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 SNX5Q9Y5X3 404 aa15.4■□□□□ 0.06
TRAPPC3-209ENST00000616395 PKD1L1Q8TDX9 2849 aa15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 A0A087WUU8 490 aa15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 SNTNA6NMZ2 147 aa15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 M0R3G1 203 aa15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 GNAO1P09471 354 aa15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 CCDC159P0C7I6 412 aa15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 FPR3P25089 353 aa15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 COMPP49747 757 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 CCR4P51679 360 aa15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 CARD18P57730 90 aa15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 GABARAPL2P60520 117 aa15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 ACTG1P63261 375 aa15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 RNPS1Q15287 305 aaKnown RBP15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 ZNF239Q16600 458 aaKnown RBP15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 PLPPR5Q32ZL2 321 aa15.39■□□□□ 0.05
TRAPPC3-209ENST00000616395 PDSS1Q5T2R2 415 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms