RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 TMEM82A0PJX8 343 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 ZNF28P17035 718 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 ACTR1BP42025 376 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 EFNB2P52799 333 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 ACTR1AP61163 376 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 DCST2Q5T1A1 773 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 OVCH1Q7RTY7 1134 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 SFTPA2Q8IWL1 248 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 OR1J4Q8NGS1 313 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 SMARCD2Q92925 531 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 GFI1Q99684 422 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 SRMSQ9H3Y6 488 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 IGFLR1Q9H665 355 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 GAREM1Q9H706 876 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 PRSS16Q9NQE7 514 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 ARHGEF17Q96PE2 2063 aaPredicted RBP12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 DUXAA6NLW8 204 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 OR10H2O60403 315 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 EIF1BO60739 113 aaKnown RBP12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 LILRB3O75022 631 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 IFNGP01579 166 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 HIST1H1CP16403 213 aaKnown RBP12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 SDHAP31040 664 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 EIF1P41567 113 aaKnown RBP12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 FRKP42685 505 aaPredicted RBP12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 ENPP7Q6UWV6 458 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 NUDT18Q6ZVK8 323 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 LNX2Q8N448 690 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 CAMKVQ8NCB2 501 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 ARL11Q969Q4 196 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 CNN2Q99439 309 aaKnown RBP12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 ARHGDIGQ99819 225 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 SELENOIQ9C0D9 397 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 TMEM27Q9HBJ8 222 aa12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 MRPS2Q9Y399 296 aaKnown RBP12.23□□□□□ -0.45
PCDHA11-202ENST00000616325 KIAA1671Q9BY89 1806 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 HTR3BO95264 441 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 RAB3DO95716 219 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 SNRNP70P08621 437 aaKnown RBP12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 ST6GAL1P15907 406 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 CPT2P23786 658 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 RPS11P62280 158 aaKnown RBP eCLIP12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 PPP2CBP62714 309 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 PPP2CAP67775 309 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 ERV3-1Q14264 604 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 ALG10BQ5I7T1 473 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 NKAPLQ5M9Q1 402 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 EXOSC6Q5RKV6 272 aaKnown RBP12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 ARHGAP40Q5TG30 622 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 JMJD6Q6NYC1 403 aaPredicted RBP12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 STEAP1BQ6NZ63 245 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 ZNF676Q8N7Q3 588 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 RASD2Q96D21 266 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 ZNF350Q9GZX5 532 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 SRA1Q9HD15 236 aaKnown RBP12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 TSPAN11A1L157 253 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 M0R036 132 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 SULT1B1O43704 296 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 AKAIN1P0CW23 69 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 MYOGP15173 224 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 ADH6P28332 368 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 PRSS3P35030 304 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 HTRA4P83105 476 aaPredicted RBP12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 ARHGAP19Q14CB8 494 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 ELAVL1Q15717 326 aaKnown RBP12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 TMEM200AQ86VY9 491 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 TMEM151BQ8IW70 566 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 ETFBKMTQ8IXQ9 262 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 HAVCR1Q96D42 359 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 Q96M85 177 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 MYADMQ96S97 322 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 MAP3K3Q99759 626 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 NCDNQ9UBB6 729 aa12.22□□□□□ -0.45
PCDHA11-202ENST00000616325 A0A1W2PPE3 182 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 A0A1W2PQU0 124 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 TVP23AA6NH52 213 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 PGAM2P15259 253 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 AKR1C4P17516 323 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 TLX1P31314 330 aaPredicted RBP12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 SQSTM1Q13501 440 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 EIF2B1Q14232 305 aaKnown RBP12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 NCMAPQ5T1S8 102 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 RPL22L1Q6P5R6 122 aaKnown RBP12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 STAC2Q6ZMT1 411 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 DENND4AQ7Z401 1863 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 MRPL43Q8N983 215 aaKnown RBP12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 LINC00615Q96LM1 132 aaPredicted RBP12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 CLCC1Q96S66 551 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 MENTQ9BUN1 341 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 CPED1A4D0V7 1026 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 P2RX6O15547 441 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 PRKAR1BP31321 381 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 ZNF136P52737 540 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 NANOS3P60323 173 aaKnown RBP12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 ACTC1P68032 377 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 ACTA1P68133 377 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 TMEM35AQ53FP2 167 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 FAM76BQ5HYJ3 339 aa12.21□□□□□ -0.45
PCDHA11-202ENST00000616325 ACER2Q5QJU3 275 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms