RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PBX2P40425 430 aa12□□□□□ -0.49
MSH6-214ENST00000616033 CDK3Q00526 305 aa12□□□□□ -0.49
MSH6-214ENST00000616033 PLEKHN1Q494U1 663 aaPredicted RBP12□□□□□ -0.49
MSH6-214ENST00000616033 EXOSC6Q5RKV6 272 aaKnown RBP12□□□□□ -0.49
MSH6-214ENST00000616033 ZNF619Q8N2I2 560 aa12□□□□□ -0.49
MSH6-214ENST00000616033 GTPBP8Q8N3Z3 284 aaPredicted RBP12□□□□□ -0.49
MSH6-214ENST00000616033 CHST4Q8NCG5 386 aa12□□□□□ -0.49
MSH6-214ENST00000616033 FGF13Q92913 245 aa12□□□□□ -0.49
MSH6-214ENST00000616033 FAM46BQ96A09 425 aa12□□□□□ -0.49
MSH6-214ENST00000616033 C10orf90Q96M02 699 aa12□□□□□ -0.49
MSH6-214ENST00000616033 RBM14Q96PK6 669 aaKnown RBP12□□□□□ -0.49
MSH6-214ENST00000616033 MYADMQ96S97 322 aa12□□□□□ -0.49
MSH6-214ENST00000616033 APMAPQ9HDC9 416 aa12□□□□□ -0.49
MSH6-214ENST00000616033 DCAF16Q9NXF7 216 aa12□□□□□ -0.49
MSH6-214ENST00000616033 A0A0A6YYC8 382 aaPredicted RBP12□□□□□ -0.49
MSH6-214ENST00000616033 SNRPGP15A8MWD9 76 aa12□□□□□ -0.49
MSH6-214ENST00000616033 I3L1I5 382 aaPredicted RBP12□□□□□ -0.49
MSH6-214ENST00000616033 OGG1O15527 345 aa12□□□□□ -0.49
MSH6-214ENST00000616033 NQO2P16083 231 aa12□□□□□ -0.49
MSH6-214ENST00000616033 SPI1P17947 270 aa12□□□□□ -0.49
MSH6-214ENST00000616033 MPGP29372 298 aa12□□□□□ -0.49
MSH6-214ENST00000616033 EEF1A1P68104 462 aaKnown RBP12□□□□□ -0.49
MSH6-214ENST00000616033 SNTB1Q13884 538 aaKnown RBP12□□□□□ -0.49
MSH6-214ENST00000616033 CCDC157Q569K6 752 aa12□□□□□ -0.49
MSH6-214ENST00000616033 PDZD11Q5EBL8 140 aa12□□□□□ -0.49
MSH6-214ENST00000616033 DMRTC1Q5HYR2 192 aa12□□□□□ -0.49
MSH6-214ENST00000616033 NAA40Q86UY6 237 aa12□□□□□ -0.49
MSH6-214ENST00000616033 ZNF227Q86WZ6 799 aa12□□□□□ -0.49
MSH6-214ENST00000616033 GALNT16Q8N428 558 aa12□□□□□ -0.49
MSH6-214ENST00000616033 OR6S1Q8NH40 331 aa12□□□□□ -0.49
MSH6-214ENST00000616033 MOAP1Q96BY2 351 aa12□□□□□ -0.49
MSH6-214ENST00000616033 ZNF681Q96N22 645 aa12□□□□□ -0.49
MSH6-214ENST00000616033 SLC6A7Q99884 636 aa12□□□□□ -0.49
MSH6-214ENST00000616033 ALG12Q9BV10 488 aa12□□□□□ -0.49
MSH6-214ENST00000616033 PRO1933Q9H354 126 aa12□□□□□ -0.49
MSH6-214ENST00000616033 RXFP3Q9NSD7 469 aa12□□□□□ -0.49
MSH6-214ENST00000616033 CES1P1Q9UKY3 287 aa12□□□□□ -0.49
MSH6-214ENST00000616033 TRAV14DV4A0A0A6YYC5 116 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 A0A1B0GV50 99 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 SLC31A1O15431 190 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 PLGP00747 810 aaPredicted RBP11.99□□□□□ -0.49
MSH6-214ENST00000616033 AKAIN1P0CW23 69 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 GAAP10253 952 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 PVRP15151 417 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 ST6GAL1P15907 406 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 ELFN2Q5R3F8 820 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 METRNLQ641Q3 311 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 ZNF784Q8NCA9 323 aaPredicted RBP11.99□□□□□ -0.49
MSH6-214ENST00000616033 OR14A16Q8NHC5 309 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 MIB2Q96AX9 1013 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 PCBD2Q9H0N5 130 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 HMSDA8MTL9 139 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 SOX1O00570 391 aaPredicted RBP11.99□□□□□ -0.49
MSH6-214ENST00000616033 EIF1BO60739 113 aaKnown RBP11.99□□□□□ -0.49
MSH6-214ENST00000616033 ICOSLGO75144 302 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 GLSO94925 669 aaPredicted RBP11.99□□□□□ -0.49
MSH6-214ENST00000616033 NID1P14543 1247 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 NDUFB7P17568 137 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 EIF1P41567 113 aaKnown RBP11.99□□□□□ -0.49
MSH6-214ENST00000616033 MLC1Q15049 377 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 ZNF658BQ4V348 819 aaPredicted RBP11.99□□□□□ -0.49
MSH6-214ENST00000616033 NUDT18Q6ZVK8 323 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 SLC36A1Q7Z2H8 476 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 GRASPQ7Z6J2 395 aaPredicted RBP11.99□□□□□ -0.49
MSH6-214ENST00000616033 JAGN1Q8N5M9 183 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 INO80EQ8NBZ0 244 aaPredicted RBP11.99□□□□□ -0.49
MSH6-214ENST00000616033 OR2L3Q8NG85 312 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 NUBPLQ8TB37 319 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 LCN9Q8WX39 176 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 CMKLR1Q99788 373 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 C17orf113A0A1B0GUU1 675 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 C11orf98E9PRG8 122 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 CTDSPLO15194 276 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 TBX19O60806 448 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 NDUFB2O95178 105 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 DBIP07108 87 aaKnown RBP11.99□□□□□ -0.49
MSH6-214ENST00000616033 SLC2A5P22732 501 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 OR2B8PP59922 312 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 DHCR24Q15392 516 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 PABPC1L2AQ5JQF8 200 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 NCMAPQ5T1S8 102 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 NAXDQ8IW45 347 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 NRSN1Q8IZ57 195 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 SVBPQ8N300 66 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 STEAP1Q9UHE8 339 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 LAMP5Q9UJQ1 280 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 GPR34Q9UPC5 381 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 SLC22A13Q9Y226 551 aa11.99□□□□□ -0.49
MSH6-214ENST00000616033 PRKXP51817 358 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 FAM53BQ14153 422 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 CDNFQ49AH0 187 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 KRBOX4Q5JUW0 171 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 PARGQ86W56 976 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 MCATQ8IVS2 390 aaKnown RBP11.98□□□□□ -0.49
MSH6-214ENST00000616033 SLC39A11Q8N1S5 342 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 ARMC10Q8N2F6 343 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 ACBD4Q8NC06 268 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 OR6K3Q8NGY3 331 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 FAM174AQ8TBP5 190 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 EDARADDQ8WWZ3 215 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms