RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 ZNF367Q7RTV3 350 aa13.16□□□□□ -0.3
CIT-219ENST00000612548 ZNF511Q8NB15 262 aa13.16□□□□□ -0.3
CIT-219ENST00000612548 FOXN4Q96NZ1 517 aa13.16□□□□□ -0.3
CIT-219ENST00000612548 TAAR6Q96RI8 345 aa13.16□□□□□ -0.3
CIT-219ENST00000612548 NDUFA13Q9P0J0 144 aa13.16□□□□□ -0.3
CIT-219ENST00000612548 B9D1Q9UPM9 204 aa13.16□□□□□ -0.3
CIT-219ENST00000612548 PCDHGB7Q9Y5F8 929 aa13.16□□□□□ -0.3
CIT-219ENST00000612548 TVP23AA6NH52 213 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 ZNF726A6NNF4 738 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 H3BSA7 217 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 TAF4O00268 1085 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 IGHG1P01857 330 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 TFP02787 698 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 LIMS3P0CW19 117 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 LIMS4P0CW20 117 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 HSMCR30P0CW71 290 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 CD79BP40259 229 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 CENPAP49450 140 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 CLRN1P58418 232 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 ETFDHQ16134 617 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 TIGD6Q17RP2 521 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 OR2G6Q5TZ20 316 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 ABLIM2Q6H8Q1 611 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 PLXDC2Q6UX71 529 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 UNQ6494/PRO21346Q6UXR6 183 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 FCRLAQ7L513 359 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 HDDC2Q7Z4H3 204 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 ZBTB46Q86UZ6 589 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 CLVS1Q8IUQ0 354 aaPredicted RBP13.15□□□□□ -0.3
CIT-219ENST00000612548 ACBD7Q8N6N7 88 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 NANOGP1Q8N7R0 232 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 POMGNT2Q8NAT1 580 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 NOXO1Q8NFA2 376 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 OR6X1Q8NH79 312 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 SLC25A44Q96H78 314 aaPredicted RBP13.15□□□□□ -0.3
CIT-219ENST00000612548 ZNF385AQ96PM9 386 aaKnown RBP13.15□□□□□ -0.3
CIT-219ENST00000612548 TIMP4Q99727 224 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 RBM38Q9H0Z9 239 aaKnown RBP13.15□□□□□ -0.3
CIT-219ENST00000612548 ERVK13-1Q9NX77 482 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 LUZP4Q9P127 313 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 CAMK2AQ9UQM7 478 aa13.15□□□□□ -0.3
CIT-219ENST00000612548 LSM2Q9Y333 95 aaKnown RBP13.15□□□□□ -0.3
CIT-219ENST00000612548 IGLV1-36A0A0B4J1U3 117 aa13.15□□□□□ -0.31
CIT-219ENST00000612548 IGHG3P01860 377 aa13.15□□□□□ -0.31
CIT-219ENST00000612548 PGA4P0DJD7 388 aa13.15□□□□□ -0.31
CIT-219ENST00000612548 PGA3P0DJD8 388 aa13.15□□□□□ -0.31
CIT-219ENST00000612548 HCCSP53701 268 aa13.15□□□□□ -0.31
CIT-219ENST00000612548 GPR107Q5VW38 600 aa13.15□□□□□ -0.31
CIT-219ENST00000612548 ERI1Q8IV48 349 aaKnown RBP13.15□□□□□ -0.31
CIT-219ENST00000612548 SLC35F2Q8IXU6 374 aa13.15□□□□□ -0.31
CIT-219ENST00000612548 ZNF775Q96BV0 537 aaPredicted RBP13.15□□□□□ -0.31
CIT-219ENST00000612548 ZNF649Q9BS31 505 aa13.15□□□□□ -0.31
CIT-219ENST00000612548 SF3B5Q9BWJ5 86 aaKnown RBP13.15□□□□□ -0.31
CIT-219ENST00000612548 JAM3Q9BX67 310 aa13.15□□□□□ -0.31
CIT-219ENST00000612548 MRPL13Q9BYD1 178 aaKnown RBP13.15□□□□□ -0.31
CIT-219ENST00000612548 LHX6Q9UPM6 363 aa13.15□□□□□ -0.31
CIT-219ENST00000612548 B3GNT3Q9Y2A9 372 aa13.15□□□□□ -0.31
CIT-219ENST00000612548 CEPT1Q9Y6K0 416 aa13.15□□□□□ -0.31
CIT-219ENST00000612548 A0A087WV48 116 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 IGKV1D-43A0A0B4J1Z2 117 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 TMEM129A0AVI4 362 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 DAPL1A0PJW8 107 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 WISP2O76076 250 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 SYNGR4O95473 234 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 CRABP1P29762 137 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 TTKP33981 857 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 SH3BGRP55822 239 aaPredicted RBP13.14□□□□□ -0.31
CIT-219ENST00000612548 WNT4P56705 351 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 ACTC1P68032 377 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 ACTA1P68133 377 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 OTPQ5XKR4 325 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 DNM1P34Q6PK57 102 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.14□□□□□ -0.31
CIT-219ENST00000612548 KLHL36Q8N4N3 616 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 RFLNBQ8N5W9 214 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 ABHD3Q8WU67 409 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 NSMAFQ92636 917 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 WDYHV1Q96HA8 205 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 ADAD1Q96M93 576 aaKnown RBP13.14□□□□□ -0.31
CIT-219ENST00000612548 ALG8Q9BVK2 526 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 TTTY10Q9BZA0 68 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 RACGAP1Q9H0H5 632 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 COA3Q9Y2R0 106 aaPredicted RBP13.14□□□□□ -0.31
CIT-219ENST00000612548 FLVCR1Q9Y5Y0 555 aa13.14□□□□□ -0.31
CIT-219ENST00000612548 A0A1W2PQL4 384 aaPredicted RBP13.13□□□□□ -0.31
CIT-219ENST00000612548 ZNF716A6NP11 495 aa13.13□□□□□ -0.31
CIT-219ENST00000612548 CYTIPO60759 359 aa13.13□□□□□ -0.31
CIT-219ENST00000612548 HLA-DQA2P01906 255 aa13.13□□□□□ -0.31
CIT-219ENST00000612548 ZNF85Q03923 595 aa13.13□□□□□ -0.31
CIT-219ENST00000612548 RASGEF1BQ0VAM2 473 aa13.13□□□□□ -0.31
CIT-219ENST00000612548 SPHARQ15513 63 aa13.13□□□□□ -0.31
CIT-219ENST00000612548 PLEKHN1Q494U1 663 aaPredicted RBP13.13□□□□□ -0.31
CIT-219ENST00000612548 ARMCX4Q5H9R4 360 aa13.13□□□□□ -0.31
CIT-219ENST00000612548 CHMP1BQ7LBR1 199 aa13.13□□□□□ -0.31
CIT-219ENST00000612548 SIAH3Q8IW03 269 aa13.13□□□□□ -0.31
CIT-219ENST00000612548 TIGD4Q8IY51 512 aa13.13□□□□□ -0.31
CIT-219ENST00000612548 ZIC4Q8N9L1 334 aa13.13□□□□□ -0.31
CIT-219ENST00000612548 GATAD2BQ8WXI9 593 aa13.13□□□□□ -0.31
CIT-219ENST00000612548 ZCCHC14Q8WYQ9 949 aaKnown RBP13.13□□□□□ -0.31
CIT-219ENST00000612548 COG8Q96MW5 612 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms