RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 GPR75O95800 540 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 UCHL1P09936 223 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 NQO2P16083 231 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 GLB1P16278 677 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 ACY1Q03154 408 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 PRTGQ2VWP7 1150 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 HBMQ6B0K9 141 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 SKA3Q8IX90 412 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 IZUMO1Q8IYV9 350 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 ARHGEF39Q8N4T4 335 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 OR56A1Q8NGH5 318 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 OR6K3Q8NGY3 331 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 EDAQ92838 391 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 GCDHQ92947 438 aaPredicted RBP14.53□□□□□ -0.08
RTN1-209ENST00000611068 RNFT2Q96EX2 444 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 LURAP1Q96LR2 239 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 WDR13Q9H1Z4 485 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 LYRM4Q9HD34 91 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 CBLCQ9ULV8 474 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 PCDHB10Q9UN67 800 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 A0A1B0GUH1 482 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 OIP5O43482 229 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 ZIC2O95409 532 aaPredicted RBP14.53□□□□□ -0.08
RTN1-209ENST00000611068 CD96P40200 585 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 LSM11P83369 360 aaKnown RBP eCLIP14.53□□□□□ -0.08
RTN1-209ENST00000611068 PIN1Q13526 163 aaPredicted RBP14.53□□□□□ -0.08
RTN1-209ENST00000611068 DUSP5Q16690 384 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 C3orf33Q6P1S2 294 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 FIGNL1Q6PIW4 674 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 RHOUQ7L0Q8 258 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 ZNF485Q8NCK3 441 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 SOX7Q9BT81 388 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 METTL1Q9UBP6 276 aaKnown RBP14.53□□□□□ -0.08
RTN1-209ENST00000611068 PISDQ9UG56 409 aa14.53□□□□□ -0.08
RTN1-209ENST00000611068 CENPVL1A0A0U1RR11 272 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 CXorf65A6NEN9 183 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 PHYHO14832 338 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 FFAR1O14842 300 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 NUDT21O43809 227 aaKnown RBP14.52□□□□□ -0.08
RTN1-209ENST00000611068 TDGF1P13385 188 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 ABCD3P28288 659 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 BDKRB2P30411 391 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 TSPAN7P41732 249 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 HMGA2P52926 109 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 HACD4Q5VWC8 232 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 TCEAL6Q6IPX3 200 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 GLDNQ6ZMI3 551 aaPredicted RBP14.52□□□□□ -0.08
RTN1-209ENST00000611068 SHISA6Q6ZSJ9 500 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 SLC29A4Q7RTT9 530 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 ZSCAN1Q8NBB4 408 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 FAM71CQ8NEG0 241 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 ZNF764Q96H86 408 aaPredicted RBP14.52□□□□□ -0.08
RTN1-209ENST00000611068 NAA11Q9BSU3 229 aaPredicted RBP14.52□□□□□ -0.08
RTN1-209ENST00000611068 MFFQ9GZY8 342 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 THSD1Q9NS62 852 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 ZNF629Q9UEG4 869 aaPredicted RBP14.52□□□□□ -0.08
RTN1-209ENST00000611068 NTNG1Q9Y2I2 539 aa14.52□□□□□ -0.08
RTN1-209ENST00000611068 ASCC3Q8N3C0 2202 aaKnown RBP14.52□□□□□ -0.08
RTN1-209ENST00000611068 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.52□□□□□ -0.09
RTN1-209ENST00000611068 EIF4E2O60573 245 aaKnown RBP14.52□□□□□ -0.09
RTN1-209ENST00000611068 IFNW1P05000 195 aa14.52□□□□□ -0.09
RTN1-209ENST00000611068 PRG2P13727 222 aa14.52□□□□□ -0.09
RTN1-209ENST00000611068 PSMB1P20618 241 aaKnown RBP14.52□□□□□ -0.09
RTN1-209ENST00000611068 SHC1P29353 583 aa14.52□□□□□ -0.09
RTN1-209ENST00000611068 GABRA4P48169 554 aa14.52□□□□□ -0.09
RTN1-209ENST00000611068 UBE2MP61081 183 aaKnown RBP14.52□□□□□ -0.09
RTN1-209ENST00000611068 PEA15Q15121 130 aa14.52□□□□□ -0.09
RTN1-209ENST00000611068 ZNF791Q3KP31 576 aaPredicted RBP14.52□□□□□ -0.09
RTN1-209ENST00000611068 GEMIN6Q8WXD5 167 aaKnown RBP14.52□□□□□ -0.09
RTN1-209ENST00000611068 PNPLA2Q96AD5 504 aa14.52□□□□□ -0.09
RTN1-209ENST00000611068 ZC3H10Q96K80 434 aaKnown RBP14.52□□□□□ -0.09
RTN1-209ENST00000611068 ZNF607Q96SK3 696 aa14.52□□□□□ -0.09
RTN1-209ENST00000611068 GINS4Q9BRT9 223 aa14.52□□□□□ -0.09
RTN1-209ENST00000611068 IFT27Q9BW83 186 aa14.52□□□□□ -0.09
RTN1-209ENST00000611068 FAM117AQ9C073 453 aa14.52□□□□□ -0.09
RTN1-209ENST00000611068 PIGMQ9H3S5 423 aa14.52□□□□□ -0.09
RTN1-209ENST00000611068 RCE1Q9Y256 329 aa14.52□□□□□ -0.09
RTN1-209ENST00000611068 GPR55Q9Y2T6 319 aaPredicted RBP14.52□□□□□ -0.09
RTN1-209ENST00000611068 DUX1O43812 170 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 GDF9O60383 454 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 SRPX2O60687 465 aaPredicted RBP14.51□□□□□ -0.09
RTN1-209ENST00000611068 SLC25A12O75746 678 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 EPPINO95925 133 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 IFNGR1P15260 489 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 POU4F2Q12837 409 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 RBM39Q14498 530 aaKnown RBP14.51□□□□□ -0.09
RTN1-209ENST00000611068 CEBPEQ15744 281 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 SLC22A10Q63ZE4 541 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 MFSD12Q6NUT3 480 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 FAAP20Q6NZ36 180 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 TMEM71Q6P5X7 295 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 OR1L3Q8NH93 324 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 ACTRT3Q9BYD9 372 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 TMEM231Q9H6L2 316 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 RNF122Q9H9V4 155 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 ASF1BQ9NVP2 202 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 PRAF2O60831 178 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 HEXAP06865 529 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 FOLR2P14207 255 aa14.51□□□□□ -0.09
RTN1-209ENST00000611068 EPHA8P29322 1005 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms