RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 CLIP4Q8N3C7 705 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 FAM110DQ8TAY7 271 aaPredicted RBP12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TESCQ96BS2 214 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TXNDC15Q96J42 360 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ASPNQ9BXN1 380 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 RSPO3Q9BXY4 272 aaPredicted RBP12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PATZ1Q9HBE1 687 aaKnown RBP12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 NPHS2Q9NP85 383 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 C1RLQ9NZP8 487 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 RNF114Q9Y508 228 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SOX21Q9Y651 276 aaPredicted RBP12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 A0A087WUJ7 227 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SRRM5B3KS81 715 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 C3orf80F5H4A9 247 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ZNF500O60304 480 aaPredicted RBP12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 FZD7O75084 574 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 NDUFA7O95182 113 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 HPRP00739 348 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 IGHV2-70P01814 119 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PPIAL4GP0DN37 164 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SELEP16581 610 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 AHCYP23526 432 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 S100A3P33764 101 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 APLNRP35414 380 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 CLNS1AP54105 237 aaKnown RBP12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SEC61A1P61619 476 aaKnown RBP12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ZNF718Q3SXZ3 478 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SLC36A2Q495M3 483 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SPANXN4Q5MJ08 99 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 COX20Q5RI15 118 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 FAM205BPQ63HN1 556 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PPP1R36Q96LQ0 422 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 CCDC115Q96NT0 180 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SH3GL3Q99963 347 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SPATA9Q9BWV2 254 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 NANOGQ9H9S0 305 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TCF7L1Q9HCS4 588 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TCF7L2Q9NQB0 619 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 CYSLTR2Q9NS75 346 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 IL20RAQ9UHF4 553 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 BTNL2Q9UIR0 455 aa12.97□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SMIM23A6NLE4 172 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 A8MXK9 166 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TM9SF1O15321 606 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ERLIN1O75477 346 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TGDSO95455 350 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TSPAN15O95858 294 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PLATP00750 562 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 BCHEP06276 602 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 CCNOP22674 350 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SERPINB5P36952 375 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 HOXC5Q00444 222 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PAX8Q06710 450 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PUDPQ08623 228 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 DEFB112Q30KQ8 113 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TMEM155Q4W5P6 130 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PDCD4Q53EL6 469 aaKnown RBP12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 DPPA2Q7Z7J5 298 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 NOA1Q8NC60 698 aaKnown RBP12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 GEMIN6Q8WXD5 167 aaKnown RBP12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SLC19A3Q9BZV2 496 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 MARCH7Q9H992 704 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 C12orf10Q9HB07 376 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 IFT52Q9Y366 437 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ARHGAP32A7KAX9 2087 aa12.96□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 NBEAL2Q6ZNJ1 2754 aa12.96□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 TMEM247A6NEH6 219 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 E9PBE3 544 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 MFN2O95140 757 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 KRT75O95678 551 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 CD80P33681 288 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 LIPAP38571 399 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 MMP15P51511 669 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 KRTAP10-3P60369 221 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 RELBQ01201 579 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 ZMAT1Q5H9K5 638 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 SPATA46Q5T0L3 261 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 C6orf89Q6UWU4 347 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 LRRN1Q6UXK5 716 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 UNQ6126/PRO20091Q6UXV3 157 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 SLC16A14Q7RTX9 510 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 SCAIQ8N9R8 606 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 IPCEF1Q8WWN9 437 aaPredicted RBP12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 UPRTQ96BW1 309 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 EPYCQ99645 322 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 TMEM38BQ9NVV0 291 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 KLHL14Q9P2G3 628 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 ASH2LQ9UBL3 628 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 EIF3KQ9UBQ5 218 aaKnown RBP12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 CGGBP1Q9UFW8 167 aaPredicted RBP12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 ZDHHC8Q9ULC8 765 aa12.95□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 ZSCAN5BA6NJL1 495 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 MYZAPP0CAP1 466 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 CRATP43155 626 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 BIDP55957 195 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 BTG1P62324 171 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 HSF2Q03933 536 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 MAPK11Q15759 364 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 WHAMMP3Q1A5X7 153 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 C2orf68Q2NKX9 166 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms