RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 ATG5Q9H1Y0 275 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 TMEM27Q9HBJ8 222 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 FLRT3Q9NZU0 649 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 DTX4Q9Y2E6 619 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 DNAH14Q0VDD8 3507 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 MPDZO75970 2070 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 A0A1B0GWA3 101 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 LATO43561 262 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 IGHV2-70P01814 119 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
CDCA3-212ENST00000604599 SNRPNP63162 240 aaKnown RBP11.32□□□□□ -0.6
CDCA3-212ENST00000604599 ELAVL1Q15717 326 aaKnown RBP11.32□□□□□ -0.6
CDCA3-212ENST00000604599 ACER2Q5QJU3 275 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 TMEM151BQ8IW70 566 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 LRRC25Q8N386 305 aaPredicted RBP11.32□□□□□ -0.6
CDCA3-212ENST00000604599 STOML3Q8TAV4 291 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 CD99L2Q8TCZ2 262 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 RPS4Y2Q8TD47 263 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 CCDC74AQ96AQ1 378 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 LMF1Q96S06 567 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 NAA11Q9BSU3 229 aaPredicted RBP11.32□□□□□ -0.6
CDCA3-212ENST00000604599 SLC46A2Q9BY10 475 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 APOBEC3BQ9UH17 382 aaKnown RBP11.32□□□□□ -0.6
CDCA3-212ENST00000604599 GPR34Q9UPC5 381 aa11.32□□□□□ -0.6
CDCA3-212ENST00000604599 PMS2P1A4D2B8 440 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 NDUFB2O95178 105 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 ITGA5P08648 1049 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 APEHP13798 732 aaKnown RBP11.31□□□□□ -0.6
CDCA3-212ENST00000604599 ZNF28P17035 718 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 RPS27P42677 84 aaKnown RBP11.31□□□□□ -0.6
CDCA3-212ENST00000604599 VASPP50552 380 aaPredicted RBP11.31□□□□□ -0.6
CDCA3-212ENST00000604599 F2RL1P55085 397 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 TAS2R19P59542 299 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 ACTBP60709 375 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 ACTG1P63261 375 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 ALKBH1Q13686 389 aaKnown RBP11.31□□□□□ -0.6
CDCA3-212ENST00000604599 ZIC1Q15915 447 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 TMEM205Q6UW68 189 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 ZNF627Q7L945 461 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 FAM220AQ7Z4H9 259 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 CASTOR1Q8WTX7 329 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 RNF141Q8WVD5 230 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 EDAQ92838 391 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 CLCC1Q96S66 551 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 SEMA6CQ9H3T2 930 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 RCC2Q9P258 522 aaKnown RBP11.31□□□□□ -0.6
CDCA3-212ENST00000604599 IKZF2Q9UKS7 526 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 NUP210LQ5VU65 1888 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 ZNF208O43345 1280 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 SLC35G4P0C7Q5 338 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 CD79AP11912 226 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 TPT1P13693 172 aaKnown RBP11.31□□□□□ -0.6
CDCA3-212ENST00000604599 CSRP1P21291 193 aaKnown RBP11.31□□□□□ -0.6
CDCA3-212ENST00000604599 DDX6P26196 483 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDCA3-212ENST00000604599 PRKCZQ05513 592 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 ALG10BQ5I7T1 473 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 CORO6Q6QEF8 472 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 C17orf99Q6UX52 265 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 C12orf40Q86WS4 652 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 NRROSQ86YC3 692 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 ZNF676Q8N7Q3 588 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 COX18Q8N8Q8 333 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 NPEPL1Q8NDH3 523 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 PAPOLGQ9BWT3 736 aaKnown RBP11.31□□□□□ -0.6
CDCA3-212ENST00000604599 MMP26Q9NRE1 261 aa11.31□□□□□ -0.6
CDCA3-212ENST00000604599 A0A0B4J2E0 115 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 CXorf51AA0A1B0GTR3 108 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 A0A1B0GX12 115 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 TMEM127O75204 238 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 AGR2O95994 175 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 ST6GAL1P15907 406 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 PJVKQ0ZLH3 352 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 LPCAT3Q6P1A2 487 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 KCTD9Q7L273 389 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 ZAR1Q86SH2 424 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 BAP18Q8IXM2 172 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 BPIFB2Q8N4F0 458 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 OR4E2Q8NGC2 313 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 GPX8Q8TED1 209 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 DCUN1D4Q92564 292 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 C3orf49Q96BT1 292 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 SLC25A21Q9BQT8 299 aaPredicted RBP11.3□□□□□ -0.6
CDCA3-212ENST00000604599 LAT2Q9GZY6 243 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 RNF122Q9H9V4 155 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 SEBOXQ9HB31 216 aaPredicted RBP11.3□□□□□ -0.6
CDCA3-212ENST00000604599 RXFP3Q9NSD7 469 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 DZANK1Q9NVP4 752 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 MRM2Q9UI43 246 aaKnown RBP11.3□□□□□ -0.6
CDCA3-212ENST00000604599 AGPAT2O15120 278 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 UPK3AO75631 287 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 CD74P04233 296 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 SFTA3P0C7M3 94 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 CPT2P23786 658 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 PPP1R1AQ13522 171 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 COL19A1Q14993 1142 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 CEBPEQ15744 281 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 C2orf76Q3KRA6 126 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 C9orf152Q5JTZ5 239 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 LY6G5CQ5SRR4 150 aa11.3□□□□□ -0.6
CDCA3-212ENST00000604599 CD163Q86VB7 1156 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms