RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PYHIN1Q6K0P9 492 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 ARSKQ6UWY0 536 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 MAMDC2Q7Z304 686 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 SYNPRQ8TBG9 265 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 JSRP1Q96MG2 331 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 ZNF578Q96N58 590 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 OR10A4Q9H209 315 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 RPH3AQ9Y2J0 694 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 HIF3AQ9Y2N7 669 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 MMACHCQ9Y4U1 282 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 EP300Q09472 2414 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 MASP2O00187 686 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 ARPC3O15145 178 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 NUDT21O43809 227 aaKnown RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 ALOX12BO75342 701 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 PDGFBP01127 241 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 TMIGD3P0DMS9 266 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 SFTPDP35247 375 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 POU3F1Q03052 451 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 TRAM1Q15629 374 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 NKAIN1Q4KMZ8 207 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 TMEM69Q5SWH9 247 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 PAPD4Q6PIY7 484 aaKnown RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 TPRA1Q86W33 373 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 ZNF248Q8NDW4 579 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 KIAA1143Q96AT1 154 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 SHDQ96IW2 340 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 GON7Q9BXV9 100 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 COMMD4Q9H0A8 199 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 HAO2Q9NYQ3 351 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 FRRS1LQ9P0K9 344 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 SIT1Q9Y3P8 196 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 TCRBV16S1A1N1A0A5B0 115 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 SLC43A1O75387 559 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 IGKV3-11P04433 115 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 DNASE1P24855 282 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 STOMP27105 288 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 RBMS1P29558 406 aaKnown RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 RPS11P62280 158 aaKnown RBP eCLIP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 FOXK1P85037 733 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 PWWP2BQ6NUJ5 590 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 COMMD2Q86X83 199 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 FAM181AQ8N9Y4 354 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 PLPP7Q8NBV4 271 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 OR1N1Q8NGS0 311 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 OR2T35Q8NGX2 323 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 OR8S1Q8NH09 359 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 ZFAND1Q8TCF1 268 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 RGP1Q92546 391 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 NARS2Q96I59 477 aaKnown RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 CRB3Q9BUF7 120 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 DPAGT1Q9H3H5 408 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 SEC61A2Q9H9S3 476 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 ZMAT3Q9HA38 289 aaKnown RBP10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 POLR1DQ9Y2S0 133 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 V9GY05 133 aa10.43□□□□□ -0.74
ARHGEF1-220ENST00000600274 A0A0A6YYJ9 748 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 TEX51A0A1B0GUA7 166 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 GDNFP39905 211 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 PLA2G7Q13093 441 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 CBFBQ13951 182 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 TOMM20Q15388 145 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 COL13A1Q5TAT6 717 aaPredicted RBP10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 C1orf140Q5VVS0 124 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 SLC16A9Q7RTY1 509 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 CADM4Q8NFZ8 388 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 OR52I2Q8NH67 350 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 OR1F2PQ96R84 312 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 SMOC1Q9H4F8 434 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 NPAP1Q9NZP6 1156 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 COA3Q9Y2R0 106 aaPredicted RBP10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 NPFFR2Q9Y5X5 522 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 TRAV8-7A0A075B6U6 113 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 DCDC2BA2VCK2 349 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 PATE3B3GLJ2 98 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 CTLA4P16410 223 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 EMP2P54851 167 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 RPS15P62841 145 aaKnown RBP10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 RNF4P78317 190 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 CCL7P80098 99 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 ALKBH1Q13686 389 aaKnown RBP10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 STPG1Q5TH74 334 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 SYS1Q8N2H4 156 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 SPEM1Q8N4L4 309 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 OR51D1Q8NGF3 324 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 ZNF501Q96CX3 271 aaPredicted RBP10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 KLHL15Q96M94 604 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 TWSG1Q9GZX9 223 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 LAT2Q9GZY6 243 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 METTL7AQ9H8H3 244 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 TRAV36DV7A0A075B6V5 113 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 ANKRD34CP0C6C1 535 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 FOSL2P15408 326 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 EIF2B1Q14232 305 aaKnown RBP10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 ANGPT1Q15389 498 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 LYSMD4Q5XG99 296 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 COMMD7Q86VX2 200 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 SLITRK4Q8IW52 837 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 NXPE2Q96DL1 559 aa10.42□□□□□ -0.74
ARHGEF1-220ENST00000600274 NPIPA5E9PKD4 350 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms