RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 H1F0P07305 194 aaKnown RBP12.3□□□□□ -0.44
LIG1-218ENST00000599322 RHCEP18577 417 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 RPL4P36578 427 aaKnown RBP12.3□□□□□ -0.44
LIG1-218ENST00000599322 PTDSS1P48651 473 aaKnown RBP12.3□□□□□ -0.44
LIG1-218ENST00000599322 RAP1BP61224 184 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 RAP1AP62834 184 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 PRKCDQ05655 676 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 CD47Q08722 323 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 LAPTM4AQ15012 233 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 FGD3Q5JSP0 725 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 B3GLCTQ6Y288 498 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 MBOAT2Q6ZWT7 520 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 NRMQ8IXM6 262 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 SLC22A24Q8N4F4 322 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 RNF148Q8N7C7 305 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 SYT14Q8NB59 555 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 CCDC197Q8NCU1 140 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 OR1J2Q8NGS2 313 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 ZNF837Q96EG3 531 aaPredicted RBP12.3□□□□□ -0.44
LIG1-218ENST00000599322 NSMCE2Q96MF7 247 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 CCT8L2Q96SF2 557 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 CDRT15Q96T59 188 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 TXNIPQ9H3M7 391 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 NELFAQ9H3P2 528 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 C1orf198Q9H425 327 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 HEATR1Q9H583 2144 aaKnown RBP12.3□□□□□ -0.44
LIG1-218ENST00000599322 GORASP2Q9H8Y8 452 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 C20orf141Q9NUB4 165 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 DCAF13Q9NV06 445 aaKnown RBP12.3□□□□□ -0.44
LIG1-218ENST00000599322 GMPR2Q9P2T1 348 aaKnown RBP12.3□□□□□ -0.44
LIG1-218ENST00000599322 AURKCQ9UQB9 309 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 HIF3AQ9Y2N7 669 aa12.3□□□□□ -0.44
LIG1-218ENST00000599322 NSD1Q96L73 2696 aaPredicted RBP12.3□□□□□ -0.44
LIG1-218ENST00000599322 CADP27708 2225 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 IQCMA0A1B0GVH7 501 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 TRIM64A6NGJ6 449 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 TRIM64BA6NI03 449 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 NPIPB13A6NJU9 1138 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 NPIPB4C9JG80 1138 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 H7C417 338 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 J3KTA2 159 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 XKRYO14609 159 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 TP53P04637 393 aaPredicted RBP12.29□□□□□ -0.44
LIG1-218ENST00000599322 CSF3P09919 207 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 PGA4P0DJD7 388 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 PGA3P0DJD8 388 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 HSD17B1P14061 328 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 NPR2P20594 1047 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 CTXN1P60606 82 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 RPS23P62266 143 aaKnown RBP12.29□□□□□ -0.44
LIG1-218ENST00000599322 TOP3AQ13472 1001 aaPredicted RBP12.29□□□□□ -0.44
LIG1-218ENST00000599322 DAG1Q14118 895 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 NRN1LQ496H8 165 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 NHLRC1Q6VVB1 395 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 Q71RC1 249 aaPredicted RBP12.29□□□□□ -0.44
LIG1-218ENST00000599322 SLC16A14Q7RTX9 510 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 NOXO1Q8NFA2 376 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 NUP37Q8NFH4 326 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 OR51A7Q8NH64 312 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 MOSPD2Q8NHP6 518 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 ASB10Q8WXI3 467 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 MCHR2Q969V1 340 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 PYURFQ96I23 114 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 COX4I2Q96KJ9 171 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 VRK1Q99986 396 aaPredicted RBP12.29□□□□□ -0.44
LIG1-218ENST00000599322 NMNAT1Q9HAN9 279 aaPredicted RBP12.29□□□□□ -0.44
LIG1-218ENST00000599322 TMEM38BQ9NVV0 291 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 CMAHPQ9Y471 501 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 SNX13Q9Y5W8 968 aa12.29□□□□□ -0.44
LIG1-218ENST00000599322 USF3Q68DE3 2245 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 A0A087WUU8 490 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 SLC22A23A1A5C7 686 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 PIP5K1CO60331 668 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 TRMUO75648 421 aaKnown RBP12.28□□□□□ -0.44
LIG1-218ENST00000599322 FAM107AO95990 144 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 IGHV4-39P01824 125 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 OR4A8P0C604 315 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 ACVR1BP36896 505 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 IFNGR2P38484 337 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 GIPRP48546 466 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 SELENOVP59797 346 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 RPL27P61353 136 aaKnown RBP12.28□□□□□ -0.44
LIG1-218ENST00000599322 TNK1Q13470 666 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 THEM4Q5T1C6 240 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 LRFN4Q6PJG9 635 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 DEFB107AQ8IZN7 70 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 ARHGAP24Q8N264 748 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 POP5Q969H6 163 aaKnown RBP12.28□□□□□ -0.44
LIG1-218ENST00000599322 NSL1Q96IY1 281 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 ALG12Q9BV10 488 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 RAB1BQ9H0U4 201 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 ZNF442Q9H7R0 627 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 SMURF2Q9HAU4 748 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 CDH20Q9HBT6 801 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 DYNLRB1Q9NP97 96 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 CCNB1IP1Q9NPC3 277 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 ARL8BQ9NVJ2 186 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 B3GNT2Q9NY97 397 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 GRHPRQ9UBQ7 328 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 GDF2Q9UK05 429 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms