RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 TRAPPC4Q9Y296 219 aa8.36□□□□□ -1.07
FARP1-226ENST00000599040 B3GALT5Q9Y2C3 310 aa8.36□□□□□ -1.07
FARP1-226ENST00000599040 EXOSC1Q9Y3B2 195 aaKnown RBP8.36□□□□□ -1.07
FARP1-226ENST00000599040 ABCA4P78363 2273 aa8.36□□□□□ -1.07
FARP1-226ENST00000599040 TRIM64A6NGJ6 449 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 KDM4EB2RXH2 506 aaPredicted RBP8.35□□□□□ -1.07
FARP1-226ENST00000599040 SULT2B1O00204 365 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 BHLHE40O14503 412 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 MYL12BO14950 172 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 DNPH1O43598 174 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 AKAP8O43823 692 aaKnown RBP8.35□□□□□ -1.07
FARP1-226ENST00000599040 PRKYO43930 277 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 NPIPB7O75200 414 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 SMIM18P0DKX4 95 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 DBTP11182 482 aaKnown RBP8.35□□□□□ -1.07
FARP1-226ENST00000599040 EPXP11678 715 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 GABRB1P18505 474 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 DCKP27707 260 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 HTR1FP30939 366 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 AQP2P41181 271 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 CAPZA2P47755 286 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 CENPAP49450 140 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 BLVRAP53004 296 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 NUDT6P53370 316 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 SLC16A1P53985 500 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 CDH15P55291 814 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 RAC1P63000 192 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 ZNF91Q05481 1191 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.35□□□□□ -1.07
FARP1-226ENST00000599040 PUDPQ08623 228 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 ST3GAL4Q11206 333 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 ZP4Q12836 540 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 OR7A5Q15622 319 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 NEDD8Q15843 81 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 BCL2A1Q16548 175 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 KLHL12Q53G59 568 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 SLC35D3Q5M8T2 416 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 SLC35F1Q5T1Q4 408 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 OR2A2Q6IF42 318 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 DNM1P34Q6PK57 102 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 P4HA3Q7Z4N8 544 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 CCDC103Q8IW40 242 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 SPARTQ8N0X7 666 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 ADPRHL1Q8NDY3 354 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 OR9Q1Q8NGQ5 310 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 APH1BQ8WW43 257 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 GGHQ92820 318 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 UBE2FQ969M7 185 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 UCN2Q96RP3 112 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 FOXC2Q99958 501 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 PIGMQ9H3S5 423 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 NRIP3Q9NQ35 241 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 ST6GALNAC2Q9UJ37 374 aa8.35□□□□□ -1.07
FARP1-226ENST00000599040 MPDZO75970 2070 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 MED12Q93074 2177 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 OR2M5A3KFT3 312 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 FAM221AA4D161 298 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 NPIPB13A6NJU9 1138 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 TRIM64CA6NLI5 447 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 NPIPB4C9JG80 1138 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 LRRN3E7EW58 273 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 C11orf98E9PRG8 122 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 M0R082 166 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 SERPINI2O75830 405 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 VAMP5O95183 116 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 PMS2P2O95744 297 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 TXNDC12O95881 172 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 CRHP06850 196 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 JUNBP17275 347 aaPredicted RBP8.34□□□□□ -1.07
FARP1-226ENST00000599040 TCEA1P23193 301 aaKnown RBP8.34□□□□□ -1.07
FARP1-226ENST00000599040 SFTPDP35247 375 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 SH3BGRP55822 239 aaPredicted RBP8.34□□□□□ -1.07
FARP1-226ENST00000599040 GFRA1P56159 465 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 RPS3AP61247 264 aaKnown RBP8.34□□□□□ -1.07
FARP1-226ENST00000599040 RPL27P61353 136 aaKnown RBP8.34□□□□□ -1.07
FARP1-226ENST00000599040 ERVK-25P63136 954 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 ACTC1P68032 377 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 ACTA1P68133 377 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 SRYQ05066 204 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 RPL18Q07020 188 aaKnown RBP8.34□□□□□ -1.07
FARP1-226ENST00000599040 ITGADQ13349 1161 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 KRR1Q13601 381 aaKnown RBP8.34□□□□□ -1.07
FARP1-226ENST00000599040 DAZAP2Q15038 168 aaPredicted RBP8.34□□□□□ -1.07
FARP1-226ENST00000599040 PON3Q15166 354 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 TBCEQ15813 527 aaPredicted RBP8.34□□□□□ -1.07
FARP1-226ENST00000599040 SMN1Q16637 294 aaKnown RBP8.34□□□□□ -1.07
FARP1-226ENST00000599040 TMEM176BQ3YBM2 270 aaPredicted RBP8.34□□□□□ -1.07
FARP1-226ENST00000599040 TMEM225Q6GV28 225 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 PLBD1Q6P4A8 553 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 THSD4Q6ZMP0 1018 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 MEPCEQ7L2J0 689 aaKnown RBP8.34□□□□□ -1.07
FARP1-226ENST00000599040 CPOQ8IVL8 374 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 UEVLDQ8IX04 471 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 MEIOBQ8N635 442 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 LRRC17Q8N6Y2 441 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 C9orf106Q8NAJ2 232 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 OR52E2Q8NGJ4 325 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 OR2T4Q8NH00 348 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 MOSPD2Q8NHP6 518 aa8.34□□□□□ -1.07
FARP1-226ENST00000599040 ZNF417Q8TAU3 575 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms