RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 NR2C1P13056 603 aa19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 PSMB1P20618 241 aaKnown RBP19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 COX5AP20674 150 aa19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 PCYT1AP49585 367 aa19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 CRISP1P54107 249 aa19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 PPP2R2BQ00005 443 aa19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 LNX2Q8N448 690 aa19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 STEAP2Q8NFT2 490 aa19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 OR4Q3Q8NH05 313 aa19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 MCHR2Q969V1 340 aa19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 ZNF837Q96EG3 531 aaPredicted RBP19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 PSMG3-AS1Q96PY0 264 aa19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 ENOPH1Q9UHY7 261 aa19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 TMEFF2Q9UIK5 374 aaPredicted RBP19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 LRRK2Q5S007 2527 aa19.46■□□□□ 0.71
CHMP2A-204ENST00000597848 PRSS37A4D1T9 235 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 HIST1H1CP16403 213 aaKnown RBP19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 CDKN2AP42771 156 aaKnown RBP19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 GIPRP48546 466 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 ALDH3A2P51648 485 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 ESRRGP62508 458 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 ARF1P84077 181 aaKnown RBP19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 SORDQ00796 357 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 HIST3H3Q16695 136 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 PGGHGQ32M88 737 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 THEM4Q5T1C6 240 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 SLC27A4Q6P1M0 643 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 ADCK1Q86TW2 530 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 OR52E2Q8NGJ4 325 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 FNDC8Q8TC99 324 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 NSMAFQ92636 917 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 TEX12Q9BXU0 123 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 ACTR6Q9GZN1 396 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 CACNA1CQ13936 2221 aa19.45■□□□□ 0.7
CHMP2A-204ENST00000597848 SLC22A23A1A5C7 686 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 TUBAL3A6NHL2 446 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 DHHO43323 396 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 AHCYL1O43865 530 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 SLC2A10O95528 541 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 RENP00797 406 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 CCKARP32238 428 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 SH3BGRP55822 239 aaPredicted RBP19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 FMODQ06828 376 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 LRRC36Q1X8D7 754 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 LPCAT4Q643R3 524 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 SP5Q6BEB4 398 aaPredicted RBP19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 OR7E24Q6IFN5 339 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 LEG1Q6P5S2 330 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 MEX3BQ6ZN04 569 aaKnown RBP19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 PTCHD4Q6ZW05 846 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 LINC01560Q8TB33 94 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 S100PBPQ96BU1 408 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 NMNAT3Q96T66 252 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 SLC29A1Q99808 456 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 RIBC2Q9H4K1 309 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 RERGLQ9H628 205 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 USE1Q9NZ43 259 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 NDRG3Q9UGV2 375 aa19.44■□□□□ 0.7
CHMP2A-204ENST00000597848 ALPLP05186 524 aa19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 GRK5P34947 590 aa19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 PEX19P40855 299 aa19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 ZNF84P51523 738 aa19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 STK11Q15831 433 aa19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 GABRA6Q16445 453 aa19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 TMEM236Q5W0B7 351 aa19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 ACSM5Q6NUN0 579 aa19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 SDR9C7Q8NEX9 313 aa19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 OR1K1Q8NGR3 316 aa19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 NMD3Q96D46 503 aaKnown RBP19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 MED18Q9BUE0 208 aa19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 SYT4Q9H2B2 425 aa19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 NKX1-2Q9UD57 310 aaPredicted RBP19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 KLHL21Q9UJP4 597 aa19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 RRP15Q9Y3B9 282 aaKnown RBP19.43■□□□□ 0.7
CHMP2A-204ENST00000597848 A0A096LPE4 126 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 A0A1W2PPZ6 126 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 RIIAD1A6NNX1 92 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 ZNF99A8MXY4 864 aaPredicted RBP19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 SEC14L2O76054 403 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 IFNGP01579 166 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 HMGN1P05114 100 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 PPP3CBP16298 524 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 KIR2DL3P43628 341 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 RAD23AP54725 363 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 CDK5Q00535 292 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 SLC34A1Q06495 639 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 PTGES3Q15185 160 aaKnown RBP19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 ALKBH2Q6NS38 261 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 ANKRD16Q6P6B7 361 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 SLC25A47Q6Q0C1 308 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 DMRTC2Q8IXT2 367 aaPredicted RBP19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 C1orf162Q8NEQ5 155 aaPredicted RBP19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 ZC3HAV1LQ96H79 300 aaKnown RBP19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 MUS81Q96NY9 551 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 WFIKKN1Q96NZ8 548 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 USB1Q9BQ65 265 aaKnown RBP19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 OR10A4Q9H209 315 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 RNPEPL1Q9HAU8 725 aa19.42■□□□□ 0.7
CHMP2A-204ENST00000597848 VSX1Q9NZR4 365 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms