RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 SLC17A1Q14916 467 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 PDK3Q15120 406 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 C1orf185Q5T7R7 199 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 KRT80Q6KB66 452 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 ACSM5Q6NUN0 579 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 PTCHD4Q6ZW05 846 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 ADCK1Q86TW2 530 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 KRTAP1-3Q8IUG1 177 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 CHERPQ8IWX8 916 aaKnown RBP10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 ABHD3Q8WU67 409 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 RASD2Q96D21 266 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 CNBD2Q96M20 576 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 Q96M85 177 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 ADAD1Q96M93 576 aaKnown RBP10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 DMRTA2Q96SC8 542 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 TM9SF2Q99805 663 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 TP63Q9H3D4 680 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 CALHM2Q9HA72 323 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 CMC2Q9NRP2 79 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 PLEKHA6Q9Y2H5 1048 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 SVEP1Q4LDE5 3571 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 CD8B2A6NJW9 211 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 ZNF716A6NP11 495 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 M0R129 80 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 SURF4O15260 269 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 TRAF3IP2O43734 574 aaPredicted RBP10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 AQP8O94778 261 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 TXNDC12O95881 172 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 RENP00797 406 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 GNAO1P09471 354 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 NR2C1P13056 603 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 ACADSP16219 412 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 DNASE1P24855 282 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 MED21Q13503 144 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 NSUN5P2Q63ZY6 315 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 OR2A2Q6IF42 318 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 CREB3L2Q70SY1 520 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 FAM122BQ7Z309 247 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 ADGRE4PQ86SQ3 457 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 ARIH2OSQ8N7S6 290 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 SDR9C7Q8NEX9 313 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 OR52E2Q8NGJ4 325 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 OR4K13Q8NH42 304 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 ZNF519Q8TB69 540 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 ASB10Q8WXI3 467 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 WNT2BQ93097 391 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 OTULINQ96BN8 352 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 MUS81Q96NY9 551 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 GP6Q9HCN6 339 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 GLRX2Q9NS18 164 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 MED29Q9NX70 200 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 ZNF346Q9UL40 294 aaKnown RBP10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 HSPE1-MOB4S4R3N1 261 aa10.68□□□□□ -0.7
SHKBP1-213ENST00000597325 IGKV3D-15A0A087WSY6 115 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 RNF212BA8MTL3 300 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 ZNF724A8MTY0 619 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 PRR23D1E9PI22 279 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 E9PQ18 207 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 ARHGEF9O43307 516 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 DENRO43583 198 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 PRKYO43930 277 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 CTAG2O75638 210 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 TGM6O95932 706 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 IGHG1P01857 330 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 PRR23D2P0DMB1 279 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 HIST1H1CP16403 213 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 MYF6P23409 242 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 CLRN1P58418 232 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 ITGADQ13349 1161 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 MESTQ5EB52 335 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 TMEM201Q5SNT2 666 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 NIPAL3Q6P499 406 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 LEG1Q6P5S2 330 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 PLXDC2Q6UX71 529 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 USP51Q70EK9 711 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 AAED1Q7RTV5 226 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 THAP5Q7Z6K1 395 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 TCEANCQ8N8B7 351 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 OR8J1Q8NGP2 316 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 OR6X1Q8NH79 312 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 TMEM163Q8TC26 289 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 TRUB1Q8WWH5 349 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 TMEM45BQ96B21 275 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 GMPPAQ96IJ6 420 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 IL4I1Q96RQ9 567 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 FN3KQ9H479 309 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 RNF122Q9H9V4 155 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 BCO1Q9HAY6 547 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 RASSF1Q9NS23 344 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 RNF6Q9Y252 685 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 RCE1Q9Y256 329 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 NOSIPQ9Y314 301 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 EMC9Q9Y3B6 208 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 FLVCR1Q9Y5Y0 555 aa10.67□□□□□ -0.7
SHKBP1-213ENST00000597325 PKD1L1Q8TDX9 2849 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 SLC35F4A4IF30 521 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 MBD3L4A6NDZ8 208 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 MBD3L3A6NE82 208 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 MBD3L5A6NJ08 208 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms