RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 FAM57AQ8TBR7 257 aa8.36□□□□□ -1.07
TRIM28-208ENST00000597172 RNF128Q8TEB7 428 aa8.36□□□□□ -1.07
TRIM28-208ENST00000597172 ABHD3Q8WU67 409 aa8.36□□□□□ -1.07
TRIM28-208ENST00000597172 FBLIM1Q8WUP2 373 aa8.36□□□□□ -1.07
TRIM28-208ENST00000597172 ASB10Q8WXI3 467 aa8.36□□□□□ -1.07
TRIM28-208ENST00000597172 PTP4A1Q93096 173 aa8.36□□□□□ -1.07
TRIM28-208ENST00000597172 RASD2Q96D21 266 aa8.36□□□□□ -1.07
TRIM28-208ENST00000597172 ZNF385AQ96PM9 386 aaKnown RBP8.36□□□□□ -1.07
TRIM28-208ENST00000597172 ANKRD60Q9BZ19 345 aa8.36□□□□□ -1.07
TRIM28-208ENST00000597172 MED29Q9NX70 200 aa8.36□□□□□ -1.07
TRIM28-208ENST00000597172 UBAP1Q9NZ09 502 aa8.36□□□□□ -1.07
TRIM28-208ENST00000597172 MCTS1Q9ULC4 181 aaKnown RBP8.36□□□□□ -1.07
TRIM28-208ENST00000597172 BAIAP2Q9UQB8 552 aa8.36□□□□□ -1.07
TRIM28-208ENST00000597172 ZNF175Q9Y473 711 aa8.36□□□□□ -1.07
TRIM28-208ENST00000597172 NOX1Q9Y5S8 564 aa8.36□□□□□ -1.07
TRIM28-208ENST00000597172 TEX13CA0A0J9YWL9 993 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 A0A1W2PRG6 482 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 NPIPB13A6NJU9 1138 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 SLC22A20A6NK97 555 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 NPIPB4C9JG80 1138 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 TLX2O43763 284 aaPredicted RBP8.35□□□□□ -1.07
TRIM28-208ENST00000597172 ZNF432O94892 652 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 BCL10O95999 233 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 TPOP07202 933 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 HOXD4P09016 255 aaPredicted RBP8.35□□□□□ -1.07
TRIM28-208ENST00000597172 ZNF43P17038 809 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 SDHAP31040 664 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 ACVR1BP36896 505 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 PCYT1AP49585 367 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 CDC42P60953 191 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 SNRPGP62308 76 aaKnown RBP8.35□□□□□ -1.07
TRIM28-208ENST00000597172 CD47Q08722 323 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 DBPQ10586 325 aaPredicted RBP8.35□□□□□ -1.07
TRIM28-208ENST00000597172 ITGADQ13349 1161 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 TOP3AQ13472 1001 aaPredicted RBP8.35□□□□□ -1.07
TRIM28-208ENST00000597172 IL18R1Q13478 541 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 MELKQ14680 651 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 ACSF3Q4G176 576 aaPredicted RBP8.35□□□□□ -1.07
TRIM28-208ENST00000597172 MESTQ5EB52 335 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 NSUN5P2Q63ZY6 315 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 GPR139Q6DWJ6 353 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 CASP12Q6UXS9 341 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 SEM1Q6ZVN7 128 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 BCDIN3DQ7Z5W3 292 aaKnown RBP8.35□□□□□ -1.07
TRIM28-208ENST00000597172 THAP5Q7Z6K1 395 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 CD163Q86VB7 1156 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 DOLPP1Q86YN1 238 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 TUSC5Q8IXB3 177 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 TCEANCQ8N8B7 351 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 SLC37A3Q8NCC5 494 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 OR52E2Q8NGJ4 325 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 OR4K13Q8NH42 304 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 FAM81AQ8TBF8 368 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 APH1BQ8WW43 257 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 TRUB1Q8WWH5 349 aaKnown RBP8.35□□□□□ -1.07
TRIM28-208ENST00000597172 HDAC2Q92769 488 aaKnown RBP8.35□□□□□ -1.07
TRIM28-208ENST00000597172 CNBD2Q96M20 576 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 IL4I1Q96RQ9 567 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 TRIB1Q96RU8 372 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 EMC6Q9BV81 110 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 HCAR1Q9BXC0 346 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 MRPL13Q9BYD1 178 aaKnown RBP8.35□□□□□ -1.07
TRIM28-208ENST00000597172 RNF122Q9H9V4 155 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 CALHM2Q9HA72 323 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 BCO1Q9HAY6 547 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 CMC2Q9NRP2 79 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 COQ3Q9NZJ6 369 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 GRHPRQ9UBQ7 328 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 GPR52Q9Y2T5 361 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 FAM215AQ9Y5M1 114 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 FLVCR1Q9Y5Y0 555 aa8.35□□□□□ -1.07
TRIM28-208ENST00000597172 ABCA1O95477 2261 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 DNAJC13O75165 2243 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 SLC35F4A4IF30 521 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 OR6C68A6NDL8 312 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 CD8B2A6NJW9 211 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 ZNF724A8MTY0 619 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 H7C1Q1 480 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 ARHGEF9O43307 516 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 WDR1O75083 606 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 WBP4O75554 376 aaKnown RBP8.34□□□□□ -1.07
TRIM28-208ENST00000597172 TRMUO75648 421 aaKnown RBP8.34□□□□□ -1.07
TRIM28-208ENST00000597172 IFNA2P01563 188 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 YES1P07947 543 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 GABRA1P14867 456 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 ACADSP16219 412 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 ABOP16442 354 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 EDNRAP25101 427 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 NOS3P29474 1203 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 BIDP55957 195 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 CLDN17P56750 224 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.34□□□□□ -1.07
TRIM28-208ENST00000597172 CDK5R2Q13319 367 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 CAMK2DQ13557 499 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 KRR1Q13601 381 aaKnown RBP8.34□□□□□ -1.07
TRIM28-208ENST00000597172 C1DQ13901 141 aaKnown RBP8.34□□□□□ -1.07
TRIM28-208ENST00000597172 MAD2L1BPQ15013 274 aaPredicted RBP8.34□□□□□ -1.07
TRIM28-208ENST00000597172 SLC25A30Q5SVS4 291 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 EEF1A1P5Q5VTE0 462 aa8.34□□□□□ -1.07
TRIM28-208ENST00000597172 AADACL4Q5VUY2 407 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms