RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 MCHR2Q969V1 340 aa15.09■□□□□ 0.01
SHKBP1-212ENST00000596163 RSRC1Q96IZ7 334 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-212ENST00000596163 SLC38A2Q96QD8 506 aa15.09■□□□□ 0.01
SHKBP1-212ENST00000596163 NELFAQ9H3P2 528 aa15.09■□□□□ 0.01
SHKBP1-212ENST00000596163 SMURF2Q9HAU4 748 aa15.09■□□□□ 0.01
SHKBP1-212ENST00000596163 CISD1Q9NZ45 108 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-212ENST00000596163 CRNNQ9UBG3 495 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-212ENST00000596163 FBXL3Q9UKT7 428 aa15.09■□□□□ 0.01
SHKBP1-212ENST00000596163 LRBAP50851 2863 aa15.09■□□□□ 0.01
SHKBP1-212ENST00000596163 POLQO75417 2590 aa15.09■□□□□ 0.01
SHKBP1-212ENST00000596163 SHISA9B4DS77 424 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 XKRYO14609 159 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 GSC2O15499 205 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 AHCYL1O43865 530 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 UBL3O95164 117 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 CRYAAP02489 173 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 OR8G3PP0DMU2 310 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 GUCA1AP43080 201 aaPredicted RBP15.08■□□□□ 0
SHKBP1-212ENST00000596163 CDH11P55287 796 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 RUNX1T1Q06455 604 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 CD47Q08722 323 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 FHL1Q13642 323 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 FLOT2Q14254 428 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 GK3PQ14409 553 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 NRN1LQ496H8 165 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 THEM4Q5T1C6 240 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 ARIH2OSQ8N7S6 290 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 IL17RDQ8NFM7 739 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 KBTBD8Q8NFY9 601 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 LILRB1Q8NHL6 650 aaPredicted RBP15.08■□□□□ 0
SHKBP1-212ENST00000596163 GNPDA2Q8TDQ7 276 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 TMEM171Q8WVE6 324 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 KATNB1Q9BVA0 655 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 MMADHCQ9H3L0 296 aaPredicted RBP15.08■□□□□ 0
SHKBP1-212ENST00000596163 YY1AP1Q9H869 796 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 REEP1Q9H902 201 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 SIGLEC7Q9Y286 467 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 PDZD2O15018 2839 aa15.08■□□□□ 0
SHKBP1-212ENST00000596163 SMPD2O60906 423 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 SEC14L2O76054 403 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 CD79AP11912 226 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 B4GALT1P15291 398 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 NPR2P20594 1047 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 FPR3P25089 353 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 ZNF133P52736 654 aaPredicted RBP15.07■□□□□ 0
SHKBP1-212ENST00000596163 ERVK-25P63136 954 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 TUBA1BP68363 451 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 TUBA4AP68366 448 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 GSG1Q2KHT4 349 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 C10orf128Q5T292 105 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 GPR139Q6DWJ6 353 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 OR2T5Q6IEZ7 315 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 C1orf94Q6P1W5 598 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 SMARCD3Q6STE5 483 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 DPY19L2P2Q6ZN68 376 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 TUBA1AQ71U36 451 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 ZER1Q7Z7L7 766 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 IGFN1Q86VF2 1251 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 SLC22A24Q8N4F4 322 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 OR2T29Q8NH02 315 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 SMAP2Q8WU79 429 aaPredicted RBP15.07■□□□□ 0
SHKBP1-212ENST00000596163 HDAC2Q92769 488 aaKnown RBP15.07■□□□□ 0
SHKBP1-212ENST00000596163 KCNK17Q96T54 332 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 CADM1Q9BY67 442 aaKnown RBP15.07■□□□□ 0
SHKBP1-212ENST00000596163 KCNN2Q9H2S1 579 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 CXorf56Q9H5V9 222 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 TMEM38BQ9NVV0 291 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 LYVE1Q9Y5Y7 322 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 ATP23Q9Y6H3 246 aa15.07■□□□□ 0
SHKBP1-212ENST00000596163 IGHV1-18A0A0C4DH31 117 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 DHRS12A0PJE2 317 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 CCNB2O95067 398 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 RAB36O95755 333 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 IGKV3-15P01624 115 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 RPS6KA3P51812 740 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 MYBPC1Q00872 1141 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 MDP1Q86V88 176 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 SPATA24Q86W54 205 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 LRRC75A-AS1Q8N1F1 130 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 ZNF519Q8TB69 540 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 ZNF570Q96NI8 536 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 TSPAN32Q96QS1 320 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 GPX7Q96SL4 187 aaPredicted RBP15.06■□□□□ 0
SHKBP1-212ENST00000596163 DHRS9Q9BPW9 319 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 CHID1Q9BWS9 393 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 CXXC4Q9H2H0 198 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 B3GNT2Q9NY97 397 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 POMPQ9Y244 141 aa15.06■□□□□ 0
SHKBP1-212ENST00000596163 ANKRD17O75179 2603 aaKnown RBP15.06■□□□□ 0
SHKBP1-212ENST00000596163 VSTM5A8MXK1 200 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 GNGT2O14610 69 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 ARHGEF9O43307 516 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 IGLV1-44P01699 117 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 HLA-HP01893 362 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 SLC6A6P31641 620 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 RAB1AP62820 205 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 TSPAN31Q12999 210 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 TESK1Q15569 626 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 RFX4Q33E94 735 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 SLC36A2Q495M3 483 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms