RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 THAP1Q9NVV9 213 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 SLCO1C1Q9NYB5 712 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 SLC25A37Q9NYZ2 338 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 GLTPQ9NZD2 209 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 GPR160Q9UJ42 338 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 PCDHGB1Q9Y5G3 927 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 PKD1L1Q8TDX9 2849 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 C5orf58C9J3I9 102 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 CLDN25C9JDP6 229 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 C11orf98E9PRG8 122 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 DHHO43323 396 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 PRSS23O95084 383 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 MFN2O95140 757 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 MT-ATP6P00846 226 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 KITP10721 976 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 AHCYP23526 432 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 GATA3P23771 443 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 UCP2P55851 309 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 WDR4P57081 412 aaKnown RBP8.47□□□□□ -1.05
LIG1-209ENST00000596104 RGS8P57771 180 aaPredicted RBP8.47□□□□□ -1.05
LIG1-209ENST00000596104 NCALDP61601 193 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 CDK6Q00534 326 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 TEKQ02763 1124 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 ZP4Q12836 540 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 FOXL1Q12952 345 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 TMEM255AQ5JRV8 349 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 LRIF1Q5T3J3 769 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 GCNT6Q5T4J0 391 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 SWT1Q5T5J6 900 aaKnown RBP8.47□□□□□ -1.05
LIG1-209ENST00000596104 REEP3Q6NUK4 255 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 LINC00114Q6XXX2 140 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 SLC35D2Q76EJ3 337 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 C10orf53Q8N6V4 93 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 OR4K5Q8NGD3 323 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 OR5J2Q8NH18 312 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 SNX33Q8WV41 574 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 C22orf15Q8WYQ4 148 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 C11orf40Q8WZ69 217 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 OR52B2Q96RD2 323 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 PAIP2Q9BPZ3 127 aaKnown RBP8.47□□□□□ -1.05
LIG1-209ENST00000596104 SPATA5L1Q9BVQ7 753 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 OR51B6Q9H340 312 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 C7orf69Q9H7B7 122 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 NTN4Q9HB63 628 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 CDH20Q9HBT6 801 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 KCNK9Q9NPC2 374 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 DDX28Q9NUL7 540 aaKnown RBP8.47□□□□□ -1.05
LIG1-209ENST00000596104 TAS2R5Q9NYW4 299 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 SELENONQ9NZV5 590 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 GMEB1Q9Y692 573 aa8.47□□□□□ -1.05
LIG1-209ENST00000596104 PRORSD1PA6NEY8 169 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 UBDO15205 165 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 ENTPD5O75356 428 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 IGHV3-13P01766 116 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 LCKP06239 509 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 MMP7P09237 267 aaPredicted RBP8.46□□□□□ -1.06
LIG1-209ENST00000596104 PGA4P0DJD7 388 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 PGA3P0DJD8 388 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 ADORA3P0DMS8 318 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 MAKP20794 623 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 RAD52P43351 418 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 MELKQ14680 651 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 ZNF74Q16587 644 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 HFEQ30201 348 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 NRN1LQ496H8 165 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 PDLIM3Q53GG5 364 aaPredicted RBP8.46□□□□□ -1.06
LIG1-209ENST00000596104 FAM209AQ5JX71 171 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 WDR93Q6P2C0 686 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 TMEM53Q6P2H8 277 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 DPPA2Q7Z7J5 298 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 KRT73Q86Y46 540 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 GOLGA6L1Q8N7Z2 621 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 ANKRD42Q8N9B4 389 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 RAB1CQ92928 201 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 ZNF566Q969W8 418 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 LRRC58Q96CX6 371 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 SLC25A44Q96H78 314 aaPredicted RBP8.46□□□□□ -1.06
LIG1-209ENST00000596104 C1orf147Q96MC9 270 aaPredicted RBP8.46□□□□□ -1.06
LIG1-209ENST00000596104 BCL2L14Q9BZR8 327 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 C1orf198Q9H425 327 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 TMEM38AQ9H6F2 299 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 SAP30LQ9HAJ7 183 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 SLAMF8Q9P0V8 285 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 PPIAL4AQ9Y536 164 aa8.46□□□□□ -1.06
LIG1-209ENST00000596104 PPIAL4EA0A075B759 164 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 TRBV5-3A0A0A0MS03 114 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 PPIAL4CA0A0B4J2A2 164 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 PPIAL4DF5H284 164 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 CHP2O43745 196 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 FMO6PO60774 539 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 UBOX5O94941 541 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 LYPD3O95274 346 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 FARS2O95363 451 aaKnown RBP8.45□□□□□ -1.06
LIG1-209ENST00000596104 PTHP01270 115 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 IGHV1-46P01743 117 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 THY1P04216 161 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 QDPRP09417 244 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 PPIAL4FP0DN26 164 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 FPR2P25090 351 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 ZFP36P26651 326 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms