RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 BCAS4Q8TDM0 211 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 HDAC2Q92769 488 aaKnown RBP9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 MCHR2Q969V1 340 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 FAM46AQ96IP4 442 aaKnown RBP9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 TNFRSF13CQ96RJ3 184 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 DHRS9Q9BPW9 319 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 KATNB1Q9BVA0 655 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 TXNIPQ9H3M7 391 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 TMEM38BQ9NVV0 291 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 TAS2R1Q9NYW7 299 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 ACTR3BQ9P1U1 418 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 POFUT2Q9Y2G5 429 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 TCRBV5S2A0A599 114 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 CENPBD1B2RD01 187 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 MCIDASD6RGH6 385 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 DHHO43323 396 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 PDE5AO76074 875 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 SLC2A10O95528 541 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 QDPRP09417 244 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 ACADSP16219 412 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF14P17017 642 aaPredicted RBP9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 TTKP33981 857 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 OMPP47874 163 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 SLC9A3P48764 834 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 DAP3P51398 398 aaKnown RBP9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 IDH3GP51553 393 aaPredicted RBP9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 CLRN1P58418 232 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 FXYD6P3P58550 94 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 MS4A2Q01362 244 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 FMODQ06828 376 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 TOP3AQ13472 1001 aaPredicted RBP9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 FGD3Q5JSP0 725 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 SHEQ5VZ18 495 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 OAFQ86UD1 273 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 SKA3Q8IX90 412 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 CLDN22Q8N7P3 220 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 OR4K5Q8NGD3 323 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 OR52J3Q8NH60 311 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF519Q8TB69 540 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 CLPTM1LQ96KA5 538 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 TSPAN32Q96QS1 320 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 KCNK17Q96T54 332 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 GPA33Q99795 319 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 GRIP2Q9C0E4 1043 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 CXorf56Q9H5V9 222 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 IL1RAPQ9NPH3 570 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 POU2F3Q9UKI9 436 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF346Q9UL40 294 aaKnown RBP9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 FAM32AQ9Y421 112 aaKnown RBP9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 UGT2A1Q9Y4X1 527 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 ATP23Q9Y6H3 246 aa9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 SONP18583 2426 aaKnown RBP9.54□□□□□ -0.88
SHKBP1-206ENST00000595523 ABCA1O95477 2261 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 IGHV2OR16-5A0A0B4J2B6 119 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 SH3PXD2BA1X283 911 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 NDUFS7O75251 213 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 PTP4A3O75365 173 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 UBOX5O94941 541 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 FABP3P05413 133 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 PATE4P0C8F1 98 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 CD99P14209 185 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 PAX7P23759 505 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 ARR3P36575 388 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 CAPZA2P47755 286 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 ATP5J2P56134 94 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 CTXN1P60606 82 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 RPL27P61353 136 aaKnown RBP9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 HGFACQ04756 655 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 PIGFQ07326 219 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 NPRL3Q12980 569 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 GSG1Q2KHT4 349 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 ANKDD1AQ495B1 522 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 C10orf128Q5T292 105 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 LCN8Q6JVE9 175 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF544Q6NX49 715 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 PRSS57Q6UWY2 283 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 TRPM8Q7Z2W7 1104 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 FAM122BQ7Z309 247 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 PIWIL3Q7Z3Z3 882 aaKnown RBP9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 YTHDF3Q7Z739 585 aaKnown RBP9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 CCDC36Q8IYA8 594 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 ARHGAP24Q8N264 748 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 MUC15Q8N387 334 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 SLC22A24Q8N4F4 322 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 GTPBP3Q969Y2 492 aaKnown RBP9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 MS4A3Q96HJ5 214 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 Q96MF0 132 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 SH3GL3Q99963 347 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 C1orf21Q9H246 121 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 MOV10Q9HCE1 1003 aaKnown RBP9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 FAIMQ9NVQ4 179 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 SIGLEC7Q9Y286 467 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 TMEM5Q9Y2B1 443 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 ADAM18Q9Y3Q7 739 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 NAV3Q8IVL0 2385 aa9.53□□□□□ -0.88
SHKBP1-206ENST00000595523 ARHGEF9O43307 516 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 IGHV4-39P01824 125 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 CRYAAP02489 173 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 CD79AP11912 226 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 ITGA2P17301 1181 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms