RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 KLK13Q9UKR3 277 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 ZNF346Q9UL40 294 aaKnown RBP4.01□□□□□ -1.77
SMAD4-216ENST00000593223 MMP24Q9Y5R2 645 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 V9GYQ6 96 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 ANKRD36CQ5JPF3 1778 aa4.01□□□□□ -1.77
SMAD4-216ENST00000593223 PCNX3Q9H6A9 2034 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 GRIN2DO15399 1336 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 FABP12A6NFH5 140 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 NKX6-3A6NJ46 265 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 SHISA7A6NL88 538 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 TEX46H3BTG2 121 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 CHUKO15111 745 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 GPX5O75715 221 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 GRAP2O75791 330 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 HPRP00739 348 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 KRT16P08779 473 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 CT45A8P0DMV1 189 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 CT45A9P0DMV2 189 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 SMIM10L1P0DMW3 83 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 ETS2P15036 469 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 GOT1P17174 413 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 SYT1P21579 422 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 CD82P27701 267 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 GTF2E2P29084 291 aaKnown RBP4□□□□□ -1.77
SMAD4-216ENST00000593223 SHC1P29353 583 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 GPR183P32249 361 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 GYG1P46976 350 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 PSMD4P55036 377 aaKnown RBP4□□□□□ -1.77
SMAD4-216ENST00000593223 ERVK-16P61578 105 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 RPL10AP62906 217 aaKnown RBP4□□□□□ -1.77
SMAD4-216ENST00000593223 PPIAP62937 165 aaKnown RBP4□□□□□ -1.77
SMAD4-216ENST00000593223 PAX8Q06710 450 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 ORC2Q13416 577 aaPredicted RBP4□□□□□ -1.77
SMAD4-216ENST00000593223 LY6DQ14210 128 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 SLC17A1Q14916 467 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 PPP1R3AQ16821 1122 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 KNOP1Q1ED39 458 aaKnown RBP4□□□□□ -1.77
SMAD4-216ENST00000593223 LRRC37A5PQ49AS3 106 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 C5orf47Q569G3 176 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 CT45A2Q5DJT8 189 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 SLC8B1Q6J4K2 584 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 ASCL4Q6XD76 172 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 HSDL2Q6YN16 418 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 C3P1Q6ZMU1 363 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 RTL4Q6ZR62 310 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 DPY19L4Q7Z388 723 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 COX8CQ7Z4L0 72 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 GOLGA7Q7Z5G4 137 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 SERPINA9Q86WD7 417 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 TRIM69Q86WT6 500 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 SLC13A5Q86YT5 568 aaPredicted RBP4□□□□□ -1.77
SMAD4-216ENST00000593223 LYG1Q8N1E2 194 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 CLEC4FQ8N1N0 589 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 ARHGAP18Q8N392 663 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 TBC1D19Q8N5T2 526 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 CCNYL1Q8N7R7 359 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 CYB561A3Q8NBI2 242 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 CHDHQ8NE62 594 aaPredicted RBP4□□□□□ -1.77
SMAD4-216ENST00000593223 OR51G2Q8NGK0 314 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 NAT6Q93015 286 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 C8orf44Q96CB5 159 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 SMIM10Q96HG1 83 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 AMDHD1Q96NU7 426 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 TSSK3Q96PN8 268 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 CGREF1Q99674 301 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 PRMT1Q99873 361 aaKnown RBP4□□□□□ -1.77
SMAD4-216ENST00000593223 APOL2Q9BQE5 337 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 ZNF251Q9BRH9 671 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 PYGO2Q9BRQ0 406 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 PARD6GQ9BYG4 376 aaPredicted RBP4□□□□□ -1.77
SMAD4-216ENST00000593223 SRRQ9GZT4 340 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 C6orf62Q9GZU0 229 aaPredicted RBP4□□□□□ -1.77
SMAD4-216ENST00000593223 TOLLIPQ9H0E2 274 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 VIPAS39Q9H9C1 493 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 FOLH1BQ9HBA9 442 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 USE1Q9NZ43 259 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 KLK11Q9UBX7 282 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 WARS2Q9UGM6 360 aaKnown RBP4□□□□□ -1.77
SMAD4-216ENST00000593223 LCMT1Q9UIC8 334 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 PSORS1C1Q9UIG5 152 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 TBX21Q9UL17 535 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 RNF6Q9Y252 685 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 STARD10Q9Y365 291 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 FADS3Q9Y5Q0 445 aa4□□□□□ -1.77
SMAD4-216ENST00000593223 FANCIQ9NVI1 1328 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 A0A1B0GTI1 187 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 KBTBD11-OT1A0A1B0GTJ5 212 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 A0A1B0GW15 77 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 A0A1W2PPE3 182 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 EPM2AB3EWF7 344 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 G3V2L1 256 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 PRAMEF26H0Y7S4 382 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 MKRN2OSH3BPM6 223 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 KLRC4-KLRK1H3BQV0 150 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 H3BTX0 84 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 TRAFD1O14545 582 aaPredicted RBP3.99□□□□□ -1.77
SMAD4-216ENST00000593223 CYB561D2O14569 222 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 B4GAT1O43505 415 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 VAPBO95292 243 aa3.99□□□□□ -1.77
SMAD4-216ENST00000593223 CLDN9O95484 217 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms