RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 FAM169BQ8N8A8 192 aa13.35□□□□□ -0.27
TRIM47-206ENST00000592942 NOXO1Q8NFA2 376 aa13.35□□□□□ -0.27
TRIM47-206ENST00000592942 KBTBD8Q8NFY9 601 aa13.35□□□□□ -0.27
TRIM47-206ENST00000592942 FGFBP3Q8TAT2 258 aa13.35□□□□□ -0.27
TRIM47-206ENST00000592942 AKAP1Q92667 903 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRIM47-206ENST00000592942 NINJ1Q92982 152 aa13.35□□□□□ -0.27
TRIM47-206ENST00000592942 POP5Q969H6 163 aaKnown RBP13.35□□□□□ -0.27
TRIM47-206ENST00000592942 SLCO4A1Q96BD0 722 aa13.35□□□□□ -0.27
TRIM47-206ENST00000592942 RSRC1Q96IZ7 334 aaKnown RBP13.35□□□□□ -0.27
TRIM47-206ENST00000592942 FOXB1Q99853 325 aa13.35□□□□□ -0.27
TRIM47-206ENST00000592942 KATNB1Q9BVA0 655 aa13.35□□□□□ -0.27
TRIM47-206ENST00000592942 B3GAT2Q9NPZ5 323 aa13.35□□□□□ -0.27
TRIM47-206ENST00000592942 NRIP3Q9NQ35 241 aa13.35□□□□□ -0.27
TRIM47-206ENST00000592942 POFUT2Q9Y2G5 429 aa13.35□□□□□ -0.27
TRIM47-206ENST00000592942 ADAM18Q9Y3Q7 739 aa13.35□□□□□ -0.27
TRIM47-206ENST00000592942 RNF115Q9Y4L5 304 aa13.35□□□□□ -0.27
TRIM47-206ENST00000592942 HEATR1Q9H583 2144 aaKnown RBP13.34□□□□□ -0.27
TRIM47-206ENST00000592942 IGHV1-18A0A0C4DH31 117 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 UNC119BA6NIH7 251 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 M0R1B8 84 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 TNFRSF11BO00300 401 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 ABCD4O14678 606 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 HS3ST1O14792 307 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 OR10H3O60404 316 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 WNT11O96014 354 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 GASTP01350 101 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 IGKV3-15P01624 115 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 IGLV1-44P01699 117 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 CBR1P16152 277 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 FPR3P25089 353 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 ACVR1BP36896 505 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 CLRN1P58418 232 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 TOP3AQ13472 1001 aaPredicted RBP13.34□□□□□ -0.27
TRIM47-206ENST00000592942 FLOT2Q14254 428 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 C10orf128Q5T292 105 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 OR2T5Q6IEZ7 315 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 SLC25A47Q6Q0C1 308 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 KLHL24Q6TFL4 600 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 TMEM108Q6UXF1 575 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 ZNF813Q6ZN06 617 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 MYPOPQ86VE0 399 aaPredicted RBP13.34□□□□□ -0.27
TRIM47-206ENST00000592942 SKA3Q8IX90 412 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 ARIH2OSQ8N7S6 290 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 PAPD5Q8NDF8 572 aaKnown RBP13.34□□□□□ -0.27
TRIM47-206ENST00000592942 OR9Q2Q8NGE9 314 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 OR2T29Q8NH02 315 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 MBD6Q96DN6 1003 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 Q96M85 177 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 GPX7Q96SL4 187 aaPredicted RBP13.34□□□□□ -0.27
TRIM47-206ENST00000592942 SEC61A2Q9H9S3 476 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 UBTD1Q9HAC8 227 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 NOX3Q9HBY0 568 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 IL20RAQ9UHF4 553 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 TMCC3Q9ULS5 477 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 AURKCQ9UQB9 309 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 UGT2A1Q9Y4X1 527 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 DSCAMO60469 2012 aa13.34□□□□□ -0.27
TRIM47-206ENST00000592942 NF1P21359 2839 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 PRRC2AP48634 2157 aaKnown RBP13.33□□□□□ -0.28
TRIM47-206ENST00000592942 DHRS12A0PJE2 317 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 ANKRD65E5RJM6 399 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 CIB2O75838 187 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 NDUFB2O95178 105 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 SLC2A10O95528 541 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 RAF1P04049 648 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 CELA3BP08861 270 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 DANCRP0C864 163 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 B4GALT1P15291 398 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 UBE2NP61088 152 aaKnown RBP13.33□□□□□ -0.28
TRIM47-206ENST00000592942 FMODQ06828 376 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 TSPAN31Q12999 210 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 RFX4Q33E94 735 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 C3orf36Q3SXR2 165 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 ZNF672Q499Z4 452 aaPredicted RBP13.33□□□□□ -0.28
TRIM47-206ENST00000592942 KLHL17Q6TDP4 642 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 TMEM179BQ7Z7N9 219 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 CCDC36Q8IYA8 594 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 ZNF611Q8N823 705 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 GNPDA2Q8TDQ7 276 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 HTRA1Q92743 480 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 ALG12Q9BV10 488 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 TMEM38BQ9NVV0 291 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 STX18Q9P2W9 335 aaKnown RBP13.33□□□□□ -0.28
TRIM47-206ENST00000592942 MAGED1Q9Y5V3 778 aaPredicted RBP13.33□□□□□ -0.28
TRIM47-206ENST00000592942 U3KQV3 271 aa13.33□□□□□ -0.28
TRIM47-206ENST00000592942 SETD2Q9BYW2 2564 aaPredicted RBP13.33□□□□□ -0.28
TRIM47-206ENST00000592942 VPS13CQ709C8 3753 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 E7EQL1 145 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 IMPA2O14732 288 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 STAMBPO95630 424 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 HLA-HP01893 362 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 PATE4P0C8F1 98 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 PAX7P23759 505 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 DNASE1P24855 282 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 HOXC12P31275 282 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 RPL4P36578 427 aaKnown RBP13.32□□□□□ -0.28
TRIM47-206ENST00000592942 ERFP50548 548 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 MICAQ29983 383 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 PGGHGQ32M88 737 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 MESTQ5EB52 335 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms