RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 SOX2P48431 317 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 CTBP2P56545 445 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 MAPK11Q15759 364 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 PDSS1Q5T2R2 415 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 ANXA8L1Q5VT79 327 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 HMGN2P46Q86SG4 172 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 TUSC5Q8IXB3 177 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 ARFGAP2Q8N6H7 521 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 FAM71CQ8NEG0 241 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 DNAAF1Q8NEP3 725 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 ATP6V1C2Q8NEY4 427 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 ZFP90Q8TF47 636 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 TMEM170AQ8WVE7 144 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 IGFBPL1Q8WX77 278 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 CPNE4Q96A23 557 aaPredicted RBP6.61□□□□□ -1.35
VMP1-213ENST00000591877 ROPN1LQ96C74 230 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 TLCD1Q96CP7 247 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 CMTM3Q96MX0 182 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 CCDC115Q96NT0 180 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 SLC35A5Q9BS91 424 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 IFT27Q9BW83 186 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 GLRX2Q9NS18 164 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 SLC6A13Q9NSD5 602 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 ZNF226Q9NYT6 803 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 MARCOQ9UEW3 520 aaPredicted RBP6.61□□□□□ -1.35
VMP1-213ENST00000591877 BTNL2Q9UIR0 455 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 A4GNTQ9UNA3 340 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 ADAM18Q9Y3Q7 739 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 CAPN7Q9Y6W3 813 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 ZFHX3Q15911 3703 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 ZANQ9Y493 2812 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 NSD1Q96L73 2696 aaPredicted RBP6.6□□□□□ -1.35
VMP1-213ENST00000591877 ZNF814B7Z6K7 855 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 SMAD9O15198 467 aaKnown RBP6.6□□□□□ -1.35
VMP1-213ENST00000591877 HDAC3O15379 428 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 JTBO76095 146 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 PLAUP00749 431 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 UBTFL6P0CB48 400 aaPredicted RBP6.6□□□□□ -1.35
VMP1-213ENST00000591877 PSMB1P20618 241 aaKnown RBP6.6□□□□□ -1.35
VMP1-213ENST00000591877 S100A3P33764 101 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 CCR4P51679 360 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 SLC18A1P54219 525 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 MAGOHP61326 146 aaKnown RBP6.6□□□□□ -1.35
VMP1-213ENST00000591877 SELENBP1Q13228 472 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 TAF11Q15544 211 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 TSC22D1Q15714 1073 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 SYPL1Q16563 259 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 ACKR1Q16570 336 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 HHATQ5VTY9 493 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 GPR139Q6DWJ6 353 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 TFAP2EQ6VUC0 442 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 PLEKHM3Q6ZWE6 761 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 FCRLAQ7L513 359 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 C16orf62Q7Z3J2 963 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 SPATA19Q7Z5L4 167 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 RNF130Q86XS8 419 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 KIRREL3Q8IZU9 778 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 GABRG1Q8N1C3 465 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 ZNF619Q8N2I2 560 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 TMCO5AQ8N6Q1 288 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 ANKFN1Q8N957 763 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 MGARPQ8TDB4 240 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 NEU4Q8WWR8 484 aaPredicted RBP6.6□□□□□ -1.35
VMP1-213ENST00000591877 ST8SIA1Q92185 356 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 ZNF75CPQ92670 426 aaPredicted RBP6.6□□□□□ -1.35
VMP1-213ENST00000591877 PSD2Q9BQI7 771 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 CCDC106Q9BWC9 280 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 SLC38A1Q9H2H9 487 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 POLE3Q9NRF9 147 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 SNTG1Q9NSN8 517 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 ACER3Q9NUN7 267 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 EXD2Q9NVH0 621 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 KLHL13Q9P2N7 655 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 ADAM21Q9UKJ8 722 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 WDR45Q9Y484 360 aa6.6□□□□□ -1.35
VMP1-213ENST00000591877 GJE1A6NN92 205 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 CYTIPO60759 359 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 OR2C1O95371 312 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 YES1P07947 543 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 PABPC4LP0CB38 370 aaKnown RBP6.59□□□□□ -1.35
VMP1-213ENST00000591877 PGCP20142 388 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 KHKP50053 298 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 KCNJ10P78508 379 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 MERTKQ12866 999 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 KPNB1Q14974 876 aaKnown RBP6.59□□□□□ -1.35
VMP1-213ENST00000591877 RNPS1Q15287 305 aaKnown RBP6.59□□□□□ -1.35
VMP1-213ENST00000591877 GPAT3Q53EU6 434 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 ATAD3BQ5T9A4 648 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 TMEM268Q5VZI3 342 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 C3orf33Q6P1S2 294 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 ZNF621Q6ZSS3 439 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 TMPPEQ6ZT21 453 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 EIF3MQ7L2H7 374 aaKnown RBP6.59□□□□□ -1.35
VMP1-213ENST00000591877 ADGRG3Q86Y34 549 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 LILRB1Q8NHL6 650 aaPredicted RBP6.59□□□□□ -1.35
VMP1-213ENST00000591877 RAB3IL1Q8TBN0 382 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 PNPT1Q8TCS8 783 aaKnown RBP6.59□□□□□ -1.35
VMP1-213ENST00000591877 OIT3Q8WWZ8 545 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 S100PBPQ96BU1 408 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms