RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 RAB39AQ14964 217 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 CDSNQ15517 529 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 MST1LQ2TV78 715 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 SLC25A35Q3KQZ1 300 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 IQCCQ4KMZ1 466 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 C19orf54Q5BKX5 351 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 CARD17Q5XLA6 110 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 TMEM200BQ69YZ2 307 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 TMEM225Q6GV28 225 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 NIPAL3Q6P499 406 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 H1FNTQ75WM6 255 aaPredicted RBP5.67□□□□□ -1.5
VPS4B-205ENST00000591383 PIWIL3Q7Z3Z3 882 aaKnown RBP5.67□□□□□ -1.5
VPS4B-205ENST00000591383 NUFIP2Q7Z417 695 aaKnown RBP5.67□□□□□ -1.5
VPS4B-205ENST00000591383 GALNT5Q7Z7M9 940 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 OAFQ86UD1 273 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 STK32CQ86UX6 486 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 IGFN1Q86VF2 1251 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 TUSC5Q8IXB3 177 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 ZNF100Q8IYN0 542 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 CDK20Q8IZL9 346 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 UBE2J2Q8N2K1 259 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 KDM8Q8N371 416 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 AQP11Q8NBQ7 271 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 ADPRHL1Q8NDY3 354 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 OR10G2Q8NGC3 310 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 SLCO4A1Q96BD0 722 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 APH1AQ96BI3 265 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 ALKBH3Q96Q83 286 aaPredicted RBP5.67□□□□□ -1.5
VPS4B-205ENST00000591383 DENND2DQ9H6A0 471 aaPredicted RBP5.67□□□□□ -1.5
VPS4B-205ENST00000591383 GLRX2Q9NS18 164 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 MRPL39Q9NYK5 338 aaKnown RBP5.67□□□□□ -1.5
VPS4B-205ENST00000591383 ZNF69Q9UC07 566 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 RASD1Q9Y272 281 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 B3GALT5Q9Y2C3 310 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 FLVCR1Q9Y5Y0 555 aa5.67□□□□□ -1.5
VPS4B-205ENST00000591383 IGKV3D-15A0A087WSY6 115 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 A0A1W2PRG6 482 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 UNC119BA6NIH7 251 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 SAC3D1A6NKF1 404 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 PRSS44E7EML9 344 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 PLPP3O14495 311 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 CDC42EP2O14613 210 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 GPR171O14626 319 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 CLOCKO15516 846 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 TRAF3IP2O43734 574 aaPredicted RBP5.66□□□□□ -1.5
VPS4B-205ENST00000591383 FZD7O75084 574 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 ENTPD5O75356 428 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 TNFSF13O75888 250 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 KRT33AO76009 404 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 KRT36O76013 467 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 SOX14O95416 240 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 CLDN14O95500 239 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 AMY1AP04745 511 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 CRHP06850 196 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 YES1P07947 543 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 ASAH2BP0C7U1 165 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 GAAP10253 952 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 ZNF23P17027 643 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 ZNF43P17038 809 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 FASP25445 335 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 RPL4P36578 427 aaKnown RBP5.66□□□□□ -1.5
VPS4B-205ENST00000591383 AQP2P41181 271 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 SLC9A3P48764 834 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 P2RY4P51582 365 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 H3F3AP84243 136 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 PRKCDQ05655 676 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 LTBQ06643 244 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 SRSF1Q07955 248 aaKnown RBP eCLIP5.66□□□□□ -1.5
VPS4B-205ENST00000591383 PMS2P11Q13670 270 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 SLC17A1Q14916 467 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 GUSBP1Q15486 140 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 TAF11Q15544 211 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 ATP6AP1Q15904 470 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 C9orf135Q5VTT2 229 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 ZFP1Q6P2D0 407 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 PGBD2Q6P3X8 592 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 TFAP2EQ6VUC0 442 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 AAED1Q7RTV5 226 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 HS3ST5Q8IZT8 346 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 PQLC1Q8N2U9 271 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 ATG16L2Q8NAA4 619 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 ICA1LQ8NDH6 482 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 OR10H5Q8NGA6 315 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 OR4C15Q8NGM1 316 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 OR6S1Q8NH40 331 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 OR51A7Q8NH64 312 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 MOSPD2Q8NHP6 518 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 LRRC46Q96FV0 321 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 ZNF385AQ96PM9 386 aaKnown RBP5.66□□□□□ -1.5
VPS4B-205ENST00000591383 RBM24Q9BX46 236 aaKnown RBP5.66□□□□□ -1.5
VPS4B-205ENST00000591383 POLDIP3Q9BY77 421 aaKnown RBP5.66□□□□□ -1.5
VPS4B-205ENST00000591383 UCK2Q9BZX2 261 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 SEMA6AQ9H2E6 1030 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 PIGMQ9H3S5 423 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 BCO1Q9HAY6 547 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 KCNJ16Q9NPI9 418 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 INIPQ9NRY2 104 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 TBC1D23Q9NUY8 699 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 MED29Q9NX70 200 aa5.66□□□□□ -1.5
VPS4B-205ENST00000591383 B3GAT1Q9P2W7 334 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms