RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 HOXC12P31275 282 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 CDAP32320 146 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 ACVR1BP36896 505 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 MAGEA2P43356 314 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 CAPZA2P47755 286 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 SLC9A3P48764 834 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 IDH3GP51553 393 aaPredicted RBP10.03□□□□□ -0.8
VMP1-211ENST00000591315 CDH11P55287 796 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 SH3BGRP55822 239 aaPredicted RBP10.03□□□□□ -0.8
VMP1-211ENST00000591315 CLRN1P58418 232 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 RPL27P61353 136 aaKnown RBP10.03□□□□□ -0.8
VMP1-211ENST00000591315 HIST3H3Q16695 136 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 DEFB113Q30KQ7 82 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 PGGHGQ32M88 737 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 DNAL1Q4LDG9 190 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 OTPQ5XKR4 325 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 SLC22A25Q6T423 547 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 TMEM108Q6UXF1 575 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 KRTAP1-3Q8IUG1 177 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 LURAP1LQ8IV03 231 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 CDK20Q8IZL9 346 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 NOXO1Q8NFA2 376 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 OR9Q2Q8NGE9 314 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 OR4C15Q8NGM1 316 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 ZNF519Q8TB69 540 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 MAGEE2Q8TD90 523 aaPredicted RBP10.03□□□□□ -0.8
VMP1-211ENST00000591315 NSMAFQ92636 917 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 GTPBP3Q969Y2 492 aaKnown RBP10.03□□□□□ -0.8
VMP1-211ENST00000591315 RASD2Q96D21 266 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 ASB9Q96DX5 294 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 KCNK17Q96T54 332 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 FOXB1Q99853 325 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 SH3GL3Q99963 347 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 MUC13Q9H3R2 512 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 B3GAT2Q9NPZ5 323 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 TMEM38BQ9NVV0 291 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 B3GNT2Q9NY97 397 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 MOKQ9UQ07 419 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 LAMP3Q9UQV4 416 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 SIGLEC7Q9Y286 467 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 UGT2A1Q9Y4X1 527 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 LYVE1Q9Y5Y7 322 aa10.03□□□□□ -0.8
VMP1-211ENST00000591315 HTR3EA5X5Y0 456 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 TNFRSF11BO00300 401 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 OR10H3O60404 316 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 DNAJC8O75937 253 aaPredicted RBP10.02□□□□□ -0.81
VMP1-211ENST00000591315 WNT11O96014 354 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 IGLV1-44P01699 117 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 CD8AP01732 235 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 IGHMP01871 453 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 IGFBP1P08833 259 aaPredicted RBP10.02□□□□□ -0.81
VMP1-211ENST00000591315 DANCRP0C864 163 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 CD79AP11912 226 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 PTAFRP25105 342 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 RPL4P36578 427 aaKnown RBP10.02□□□□□ -0.81
VMP1-211ENST00000591315 DAP3P51398 398 aaKnown RBP10.02□□□□□ -0.81
VMP1-211ENST00000591315 CHRNB3Q05901 458 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 TRAP1Q12931 704 aaKnown RBP10.02□□□□□ -0.81
VMP1-211ENST00000591315 NPRL3Q12980 569 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 ETFDHQ16134 617 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 MTX3Q5HYI7 312 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 PGBD2Q6P3X8 592 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 SLC25A47Q6Q0C1 308 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 KLHL17Q6TDP4 642 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 ZNF611Q8N823 705 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 CANT1Q8WVQ1 401 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 NINJ1Q92982 152 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 MBD6Q96DN6 1003 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 RADILQ96JH8 1075 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 ZNF75AQ96N20 296 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 FOXN4Q96NZ1 517 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 SLC38A2Q96QD8 506 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 CCL19Q99731 98 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 CISD1Q9NZ45 108 aaKnown RBP10.02□□□□□ -0.81
VMP1-211ENST00000591315 SLC7A8Q9UHI5 535 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 AURKCQ9UQB9 309 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 POMPQ9Y244 141 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 TMEM5Q9Y2B1 443 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 MAGED1Q9Y5V3 778 aaPredicted RBP10.02□□□□□ -0.81
VMP1-211ENST00000591315 ATP23Q9Y6H3 246 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 U3KQV3 271 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 TLN2Q9Y4G6 2542 aa10.02□□□□□ -0.81
VMP1-211ENST00000591315 TEX13CA0A0J9YWL9 993 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 ARHGEF9O43307 516 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 PPP1R3DO95685 299 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 SCG5P05408 212 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 CD14P08571 375 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 CBR1P16152 277 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 GIPRP48546 466 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 GSSP48637 474 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 ZNF133P52736 654 aaPredicted RBP10.01□□□□□ -0.81
VMP1-211ENST00000591315 HMGA2P52926 109 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 SMIM11AP58511 58 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 HGFACQ04756 655 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 CD47Q08722 323 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 MESTQ5EB52 335 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 ZNF770Q6IQ21 691 aaPredicted RBP10.01□□□□□ -0.81
VMP1-211ENST00000591315 C20orf204Q6ZNR8 217 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 ZNF627Q7L945 461 aa10.01□□□□□ -0.81
VMP1-211ENST00000591315 FAM122BQ7Z309 247 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms