RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 MDP1Q86V88 176 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 WFDC11Q8NEX6 87 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 NOXO1Q8NFA2 376 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 OR13C2Q8NGS9 318 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 OR52J3Q8NH60 311 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 MCHR2Q969V1 340 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 MCUR1Q96AQ8 359 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 DHRS1Q96LJ7 313 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 TNFRSF13CQ96RJ3 184 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 ZNF347Q96SE7 839 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 SEPHS2Q99611 448 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 DHRS9Q9BPW9 319 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 KCNS3Q9BQ31 491 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 KATNB1Q9BVA0 655 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 IL1RAPQ9NPH3 570 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 B3GNT2Q9NY97 397 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 TAS2R1Q9NYW7 299 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 STX18Q9P2W9 335 aaKnown RBP8□□□□□ -1.13
DNMT1-223ENST00000591239 TMEM5Q9Y2B1 443 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 ATP23Q9Y6H3 246 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 MED13LQ71F56 2210 aa8□□□□□ -1.13
DNMT1-223ENST00000591239 NIPBLQ6KC79 2804 aaeCLIP8□□□□□ -1.13
DNMT1-223ENST00000591239 ZANQ9Y493 2812 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 ACANP16112 2415 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 TRBV4-1A0A0J9YWV2 114 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 DHHO43323 396 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 PDE5AO76074 875 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 GADD45GO95257 159 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 IGHMP01871 453 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 CRYAAP02489 173 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 FABP3P05413 133 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 CELA3BP08861 270 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 TTKP33981 857 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 FABP6P51161 128 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 IDH3GP51553 393 aaPredicted RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 ATP5J2P56134 94 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 SMIM11AP58511 58 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 RPL27P61353 136 aaKnown RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 MYBPC1Q00872 1141 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 NAAAQ02083 359 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 PIGFQ07326 219 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 NPRL3Q12980 569 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 TOP3AQ13472 1001 aaPredicted RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 TRIM25Q14258 630 aaKnown RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 SEC23BQ15437 767 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 TAF11Q15544 211 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 GSG1Q2KHT4 349 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 ZBED5Q49AG3 693 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 MTX3Q5HYI7 312 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 AGAP6Q5VW22 663 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 ZNF544Q6NX49 715 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 PRSS57Q6UWY2 283 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 YTHDF3Q7Z739 585 aaKnown RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 MYPOPQ86VE0 399 aaPredicted RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 IGFN1Q86VF2 1251 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 ZDHHC21Q8IVQ6 265 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 FBXL14Q8N1E6 418 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 MUC15Q8N387 334 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 SLC22A24Q8N4F4 322 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 LRRC75AQ8NAA5 344 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 OR4K5Q8NGD3 323 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 NANOS1Q8WY41 292 aaKnown RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 HDAC2Q92769 488 aaKnown RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 GTPBP3Q969Y2 492 aaKnown RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 TRMT61AQ96FX7 289 aaKnown RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 FAM46AQ96IP4 442 aaKnown RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 FUZQ9BT04 418 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 TRAF4Q9BUZ4 470 aaPredicted RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 GRIP2Q9C0E4 1043 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 C1orf21Q9H246 121 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 MUC13Q9H3R2 512 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 DENND2DQ9H6A0 471 aaPredicted RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 SEC61A2Q9H9S3 476 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 TMEM38BQ9NVV0 291 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 ZNF224Q9NZL3 707 aa7.99□□□□□ -1.13
DNMT1-223ENST00000591239 ZNF346Q9UL40 294 aaKnown RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 PRPF19Q9UMS4 504 aaKnown RBP7.99□□□□□ -1.13
DNMT1-223ENST00000591239 MTORP42345 2549 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 ZFHX3Q15911 3703 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 IGHV2OR16-5A0A0B4J2B6 119 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 SH3PXD2BA1X283 911 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 ENTPD5O75356 428 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 PTP4A3O75365 173 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 UBOX5O94941 541 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 SLC2A10O95528 541 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 OR8G3PP0DMU2 310 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 ZNF26P17031 533 aaPredicted RBP7.98□□□□□ -1.13
DNMT1-223ENST00000591239 ATP6V1B2P21281 511 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 CALCRP30988 508 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 APOBEC3AP31941 199 aaPredicted RBP7.98□□□□□ -1.13
DNMT1-223ENST00000591239 RPL4P36578 427 aaKnown RBP7.98□□□□□ -1.13
DNMT1-223ENST00000591239 ACVR1BP36896 505 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 CDKN1AP38936 164 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 OMPP47874 163 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 LIMS1P48059 325 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 ZNF84P51523 738 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 ZNF133P52736 654 aaPredicted RBP7.98□□□□□ -1.13
DNMT1-223ENST00000591239 RAB1AP62820 205 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 MS4A2Q01362 244 aa7.98□□□□□ -1.13
DNMT1-223ENST00000591239 SPIBQ01892 262 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms