RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 CD47Q08722 323 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 KRR1Q13601 381 aaKnown RBP16.83■□□□□ 0.28
DDX39A-214ENST00000590556 MESTQ5EB52 335 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 OR7E24Q6IFN5 339 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 LRFN4Q6PJG9 635 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 TEX47Q8TBZ9 253 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 MCHR2Q969V1 340 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 ZNF837Q96EG3 531 aaPredicted RBP16.83■□□□□ 0.28
DDX39A-214ENST00000590556 WFIKKN1Q96NZ8 548 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 RBP7Q96R05 134 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 USB1Q9BQ65 265 aaKnown RBP16.83■□□□□ 0.28
DDX39A-214ENST00000590556 MED18Q9BUE0 208 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 SLC24A3Q9HC58 644 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 PAPOLBQ9NRJ5 636 aaKnown RBP16.83■□□□□ 0.28
DDX39A-214ENST00000590556 POFUT2Q9Y2G5 429 aa16.83■□□□□ 0.28
DDX39A-214ENST00000590556 SH3D21A4FU49 640 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 BHLHE40O14503 412 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 AHCYL1O43865 530 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 POU1F1P28069 291 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 RCN1Q15293 331 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 GABRA6Q16445 453 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 THEM4Q5T1C6 240 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 ADCK1Q86TW2 530 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 C1orf162Q8NEQ5 155 aaPredicted RBP16.82■□□□□ 0.28
DDX39A-214ENST00000590556 OR2T33Q8NG76 320 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 FNDC8Q8TC99 324 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 MUS81Q96NY9 551 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 KRT84Q9NSB2 600 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 CRIM1Q9NZV1 1036 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 BAIAP2Q9UQB8 552 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 PKDREJQ9NTG1 2253 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 ADGRG4Q8IZF6 3080 aa16.82■□□□□ 0.28
DDX39A-214ENST00000590556 HECTD1Q9ULT8 2610 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 PRSS37A4D1T9 235 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 H7C1C5 153 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 DHHO43323 396 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 LCN6P62502 163 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 STK11Q15831 433 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 SLC35F1Q5T1Q4 408 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 KDM4DQ6B0I6 523 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 ANKRD16Q6P6B7 361 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 P2RY8Q86VZ1 359 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 JAZF1Q86VZ6 243 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 LNX2Q8N448 690 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 OR1K1Q8NGR3 316 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 FAM222BQ8WU58 562 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 HSD17B8Q92506 261 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 NMD3Q96D46 503 aaKnown RBP16.81■□□□□ 0.28
DDX39A-214ENST00000590556 ZC3HAV1LQ96H79 300 aaKnown RBP16.81■□□□□ 0.28
DDX39A-214ENST00000590556 DACH2Q96NX9 599 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 CIB1Q99828 191 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 OSBPL10Q9BXB5 764 aa16.81■□□□□ 0.28
DDX39A-214ENST00000590556 SLC22A23A1A5C7 686 aa16.8■□□□□ 0.28
DDX39A-214ENST00000590556 OR5H1A6NKK0 313 aa16.8■□□□□ 0.28
DDX39A-214ENST00000590556 ZNF99A8MXY4 864 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-214ENST00000590556 MITFO75030 526 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-214ENST00000590556 SLC2A10O95528 541 aa16.8■□□□□ 0.28
DDX39A-214ENST00000590556 ANPEPP15144 967 aa16.8■□□□□ 0.28
DDX39A-214ENST00000590556 HIST1H1CP16403 213 aaKnown RBP16.8■□□□□ 0.28
DDX39A-214ENST00000590556 CDKN2AP42771 156 aaKnown RBP16.8■□□□□ 0.28
DDX39A-214ENST00000590556 ZNF84P51523 738 aa16.8■□□□□ 0.28
DDX39A-214ENST00000590556 FMODQ06828 376 aa16.8■□□□□ 0.28
DDX39A-214ENST00000590556 TIMM23BQ5SRD1 257 aa16.8■□□□□ 0.28
DDX39A-214ENST00000590556 C22orf34Q6ZV56 151 aa16.8■□□□□ 0.28
DDX39A-214ENST00000590556 PTCHD4Q6ZW05 846 aa16.8■□□□□ 0.28
DDX39A-214ENST00000590556 PARP8Q8N3A8 854 aa16.8■□□□□ 0.28
DDX39A-214ENST00000590556 C17orf78Q8N4C9 275 aa16.8■□□□□ 0.28
DDX39A-214ENST00000590556 OR4Q3Q8NH05 313 aa16.8■□□□□ 0.28
DDX39A-214ENST00000590556 OR4K13Q8NH42 304 aa16.8■□□□□ 0.28
DDX39A-214ENST00000590556 BCL2L2Q92843 193 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-214ENST00000590556 RBM4BQ9BQ04 359 aaKnown RBP16.8■□□□□ 0.28
DDX39A-214ENST00000590556 RBM4Q9BWF3 364 aaKnown RBP16.8■□□□□ 0.28
DDX39A-214ENST00000590556 VSX1Q9NZR4 365 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-214ENST00000590556 A0A096LPE4 126 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 A0A1W2PPZ6 126 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 CASKO14936 926 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 SEC14L2O76054 403 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 RENP00797 406 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 EPXP11678 715 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 IGFBP5P24593 272 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 HOXC12P31275 282 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 GIPRP48546 466 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 ZNF133P52736 654 aaPredicted RBP16.79■□□□□ 0.28
DDX39A-214ENST00000590556 PPP2R2BQ00005 443 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.79■□□□□ 0.28
DDX39A-214ENST00000590556 GINS1Q14691 196 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 TAB1Q15750 504 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 PGGHGQ32M88 737 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 HIKESHIQ53FT3 197 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 C10orf128Q5T292 105 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 ALKBH2Q6NS38 261 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 SLC27A4Q6P1M0 643 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 LEG1Q6P5S2 330 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 SLC25A47Q6Q0C1 308 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 ZNF813Q6ZN06 617 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 IQCF1Q8N6M8 205 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 OR52E2Q8NGJ4 325 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 NSMAFQ92636 917 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 MUCL1Q96DR8 90 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 BOD1Q96IK1 185 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms