RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 ZBTB46Q86UZ6 589 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 OR9Q1Q8NGQ5 310 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 OR6N1Q8NGY5 312 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 APH1AQ96BI3 265 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 TTYH2Q9BSA4 534 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 HCAR1Q9BXC0 346 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 YTHDF1Q9BYJ9 559 aaKnown RBP13.43□□□□□ -0.26
DDX39A-211ENST00000590239 LINC00470Q9BZP3 86 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 MED20Q9H944 212 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 RPRD1BQ9NQG5 326 aaKnown RBP13.43□□□□□ -0.26
DDX39A-211ENST00000590239 PLCXD1Q9NUJ7 323 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 GLTPQ9NZD2 209 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 AASSQ9UDR5 926 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 TINAGQ9UJW2 476 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.43□□□□□ -0.26
DDX39A-211ENST00000590239 MOKQ9UQ07 419 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 SHANK1Q9Y566 2161 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 PCDHGB5Q9Y5G0 923 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 BSNQ9UPA5 3926 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 KALRNO60229 2985 aa13.43□□□□□ -0.26
DDX39A-211ENST00000590239 E9PLN8 166 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 SLC16A7O60669 478 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 TOXO94900 526 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 CCDC159P0C7I6 412 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 HTR1FP30939 366 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 CEACAM8P31997 349 aaPredicted RBP13.42□□□□□ -0.26
DDX39A-211ENST00000590239 CA7P43166 264 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 CENPAP49450 140 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 BLVRAP53004 296 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 PER3P56645 1201 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 SLC35D3Q5M8T2 416 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 RBM48Q5RL73 367 aaKnown RBP13.42□□□□□ -0.26
DDX39A-211ENST00000590239 RIPPLY2Q5TAB7 128 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 UGT2A3Q6UWM9 527 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 MEPCEQ7L2J0 689 aaKnown RBP13.42□□□□□ -0.26
DDX39A-211ENST00000590239 NUFIP2Q7Z417 695 aaKnown RBP13.42□□□□□ -0.26
DDX39A-211ENST00000590239 BCDIN3DQ7Z5W3 292 aaKnown RBP13.42□□□□□ -0.26
DDX39A-211ENST00000590239 ZNF100Q8IYN0 542 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 GCNT2Q8N0V5 402 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 OR6V1Q8N148 313 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 ZNF786Q8N393 782 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 GPR137CQ8N3F9 429 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 POMGNT2Q8NAT1 580 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 BBS1Q8NFJ9 593 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 OR6K3Q8NGY3 331 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 NR1H4Q96RI1 486 aaPredicted RBP13.42□□□□□ -0.26
DDX39A-211ENST00000590239 VKORC1Q9BQB6 163 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 NUAK2Q9H093 628 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 RACGAP1Q9H0H5 632 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 SLCO5A1Q9H2Y9 848 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 SRA1Q9HD15 236 aaKnown RBP13.42□□□□□ -0.26
DDX39A-211ENST00000590239 B3GAT2Q9NPZ5 323 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 ASB6Q9NWX5 421 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 WARS2Q9UGM6 360 aaKnown RBP13.42□□□□□ -0.26
DDX39A-211ENST00000590239 B9D1Q9UPM9 204 aa13.42□□□□□ -0.26
DDX39A-211ENST00000590239 ALPK2Q86TB3 2170 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 IGLV1-36A0A0B4J1U3 117 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 SLC22A31A6NKX4 558 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 DCTN6O00399 190 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 KHDRBS3O75525 346 aaKnown RBP13.41□□□□□ -0.26
DDX39A-211ENST00000590239 STSP08842 583 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 QDPRP09417 244 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 TMIGD3P0DMS9 266 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-211ENST00000590239 CTLA4P16410 223 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 FMO3P31513 532 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 KIR2DL2P43627 348 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-211ENST00000590239 OR3A2P47893 321 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 CDH11P55287 796 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 APOFQ13790 326 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 STK11Q15831 433 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 SMN1Q16637 294 aaKnown RBP13.41□□□□□ -0.26
DDX39A-211ENST00000590239 KLHL12Q53G59 568 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 C10orf128Q5T292 105 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 LCN1P1Q5VSP4 162 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 TMEM211Q6ICI0 200 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 LRFN4Q6PJG9 635 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 SLC25A47Q6Q0C1 308 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 C3P1Q6ZMU1 363 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 RPRMLQ8N4K4 120 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 GALNT11Q8NCW6 608 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 MCHR2Q969V1 340 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 TSSK2Q96PF2 358 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 BBC3Q96PG8 261 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-211ENST00000590239 TEAD3Q99594 435 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 OR51V1Q9H2C8 321 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 SCN3BQ9NY72 215 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 HAO2Q9NYQ3 351 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 RPL36Q9Y3U8 105 aaKnown RBP13.41□□□□□ -0.26
DDX39A-211ENST00000590239 COL6A6A6NMZ7 2263 aa13.41□□□□□ -0.26
DDX39A-211ENST00000590239 RP1L1Q8IWN7 2480 aaPredicted RBP13.4□□□□□ -0.26
DDX39A-211ENST00000590239 ZGRF1Q86YA3 2104 aa13.4□□□□□ -0.26
DDX39A-211ENST00000590239 TRGV8A0A0C4DH27 118 aa13.4□□□□□ -0.26
DDX39A-211ENST00000590239 CCDC182A6NF36 153 aa13.4□□□□□ -0.26
DDX39A-211ENST00000590239 SLC1A7O00341 560 aa13.4□□□□□ -0.26
DDX39A-211ENST00000590239 TNFSF13O75888 250 aa13.4□□□□□ -0.26
DDX39A-211ENST00000590239 GLCEO94923 617 aa13.4□□□□□ -0.26
DDX39A-211ENST00000590239 CNOT4O95628 575 aaKnown RBP13.4□□□□□ -0.26
DDX39A-211ENST00000590239 GYPBP06028 91 aa13.4□□□□□ -0.26
DDX39A-211ENST00000590239 CLUP10909 449 aa13.4□□□□□ -0.26
DDX39A-211ENST00000590239 PYCR1P32322 319 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms