RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 VSX1Q9NZR4 365 aaPredicted RBP12.02□□□□□ -0.49
VMP1-210ENST00000589823 NCOA6Q14686 2063 aaPredicted RBP12.01□□□□□ -0.49
VMP1-210ENST00000589823 INTS1Q8N201 2190 aaKnown RBP12.01□□□□□ -0.49
VMP1-210ENST00000589823 SLC22A23A1A5C7 686 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 WIPF3A6NGB9 483 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 H7C1C5 153 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 SNAP29O95721 258 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 ZNF3P17036 446 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 POLR2IP36954 125 aaKnown RBP12.01□□□□□ -0.49
VMP1-210ENST00000589823 CD79BP40259 229 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 CDKN2AP42771 156 aaKnown RBP12.01□□□□□ -0.49
VMP1-210ENST00000589823 ZNF84P51523 738 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 LCN6P62502 163 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 TGFBR3Q03167 851 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 SRSF1Q07955 248 aaKnown RBP eCLIP12.01□□□□□ -0.49
VMP1-210ENST00000589823 P2RY6Q15077 328 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 CDSNQ15517 529 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 HIST3H3Q16695 136 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 FBXL19-AS1Q494R0 122 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 PHYHD1Q5SRE7 291 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 C9orf135Q5VTT2 229 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 SLX4IPQ5VYV7 408 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 DNM1P34Q6PK57 102 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 PTCHD4Q6ZW05 846 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 GABRG1Q8N1C3 465 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 ZNF555Q8NEP9 628 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 RNASE6Q93091 150 aaKnown RBP12.01□□□□□ -0.49
VMP1-210ENST00000589823 MCHR2Q969V1 340 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 SNX18Q96RF0 628 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 MBOAT4Q96T53 435 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 NMNAT3Q96T66 252 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 CRLF2Q9HC73 371 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 GALNT8Q9NY28 637 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 TAS2R16Q9NYV7 291 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 TVP23BQ9NYZ1 205 aa12.01□□□□□ -0.49
VMP1-210ENST00000589823 UBR5O95071 2799 aaPredicted RBP12□□□□□ -0.49
VMP1-210ENST00000589823 CIB4A0PJX0 185 aa12□□□□□ -0.49
VMP1-210ENST00000589823 RPL36A-HNRNPH2H7BZ11 118 aa12□□□□□ -0.49
VMP1-210ENST00000589823 SURF4O15260 269 aa12□□□□□ -0.49
VMP1-210ENST00000589823 DHHO43323 396 aa12□□□□□ -0.49
VMP1-210ENST00000589823 PAICSP22234 425 aaKnown RBP12□□□□□ -0.49
VMP1-210ENST00000589823 IGHV1-2P23083 117 aa12□□□□□ -0.49
VMP1-210ENST00000589823 IL32P24001 234 aa12□□□□□ -0.49
VMP1-210ENST00000589823 EPHA2P29317 976 aa12□□□□□ -0.49
VMP1-210ENST00000589823 CRABP1P29762 137 aa12□□□□□ -0.49
VMP1-210ENST00000589823 PTDSS1P48651 473 aaKnown RBP12□□□□□ -0.49
VMP1-210ENST00000589823 CDC42P60953 191 aa12□□□□□ -0.49
VMP1-210ENST00000589823 STK11Q15831 433 aa12□□□□□ -0.49
VMP1-210ENST00000589823 SNAPC1Q16533 368 aa12□□□□□ -0.49
VMP1-210ENST00000589823 CEACAM16Q2WEN9 425 aa12□□□□□ -0.49
VMP1-210ENST00000589823 FBXW10Q5XX13 1052 aa12□□□□□ -0.49
VMP1-210ENST00000589823 LINGO2Q7L985 606 aa12□□□□□ -0.49
VMP1-210ENST00000589823 CXorf67Q86X51 503 aaPredicted RBP12□□□□□ -0.49
VMP1-210ENST00000589823 SLC37A3Q8NCC5 494 aa12□□□□□ -0.49
VMP1-210ENST00000589823 NPEPL1Q8NDH3 523 aa12□□□□□ -0.49
VMP1-210ENST00000589823 NRG4Q8WWG1 115 aa12□□□□□ -0.49
VMP1-210ENST00000589823 KISS1RQ969F8 398 aaPredicted RBP12□□□□□ -0.49
VMP1-210ENST00000589823 HDHD5Q9BXW7 423 aa12□□□□□ -0.49
VMP1-210ENST00000589823 GRIP2Q9C0E4 1043 aa12□□□□□ -0.49
VMP1-210ENST00000589823 SYT4Q9H2B2 425 aa12□□□□□ -0.49
VMP1-210ENST00000589823 RERGLQ9H628 205 aa12□□□□□ -0.49
VMP1-210ENST00000589823 DIDO1Q9BTC0 2240 aaKnown RBP12□□□□□ -0.49
VMP1-210ENST00000589823 MYO18BQ8IUG5 2567 aa12□□□□□ -0.49
VMP1-210ENST00000589823 CLEC18AA5D8T8 446 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 C16orf97H3BN30 126 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 SLC16A7O60669 478 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 LYZL6O75951 148 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 SLC2A10O95528 541 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 ITGA5P08648 1049 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 PSMB1P20618 241 aaKnown RBP11.99□□□□□ -0.49
VMP1-210ENST00000589823 COX5AP20674 150 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 GUCA1AP43080 201 aaPredicted RBP11.99□□□□□ -0.49
VMP1-210ENST00000589823 PCYT1AP49585 367 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 ZNF133P52736 654 aaPredicted RBP11.99□□□□□ -0.49
VMP1-210ENST00000589823 SH3BGRP55822 239 aaPredicted RBP11.99□□□□□ -0.49
VMP1-210ENST00000589823 FMODQ06828 376 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 FAM27E3Q08E93 113 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 CRMP1Q14194 572 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 C10orf128Q5T292 105 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 SFRP5Q5T4F7 317 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 C12orf73Q69YU5 71 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 LRFN4Q6PJG9 635 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 SLC25A47Q6Q0C1 308 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 CLEC18BQ6UXF7 455 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 STAC2Q6ZMT1 411 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 BHLHA15Q7RTS1 189 aaPredicted RBP11.99□□□□□ -0.49
VMP1-210ENST00000589823 DHRSXQ8N5I4 330 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 ZNF433Q8N7K0 673 aaPredicted RBP11.99□□□□□ -0.49
VMP1-210ENST00000589823 CYB561A3Q8NBI2 242 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 CLEC18CQ8NCF0 446 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 NSMAFQ92636 917 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 OTULINQ96BN8 352 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 NUAK2Q9H093 628 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 SRA1Q9HD15 236 aaKnown RBP11.99□□□□□ -0.49
VMP1-210ENST00000589823 RPRD1BQ9NQG5 326 aaKnown RBP11.99□□□□□ -0.49
VMP1-210ENST00000589823 FAM118AQ9NWS6 357 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 IMPAD1Q9NX62 359 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 GPR52Q9Y2T5 361 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 GMPPBQ9Y5P6 360 aa11.99□□□□□ -0.49
VMP1-210ENST00000589823 PCNX1Q96RV3 2341 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms