RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 KCTD14Q9BQ13 255 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-208ENST00000588692 FNDC11Q9BVV2 318 aa12.51□□□□□ -0.41
DDX39A-208ENST00000588692 MRPL13Q9BYD1 178 aaKnown RBP12.51□□□□□ -0.41
DDX39A-208ENST00000588692 MYOZ1Q9NP98 299 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-208ENST00000588692 SPAG4Q9NPE6 437 aa12.51□□□□□ -0.41
DDX39A-208ENST00000588692 GMPR2Q9P2T1 348 aaKnown RBP12.51□□□□□ -0.41
DDX39A-208ENST00000588692 SPEF1Q9Y4P9 236 aa12.51□□□□□ -0.41
DDX39A-208ENST00000588692 MGRN1O60291 552 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 SERPINA1P01009 418 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 QDPRP09417 244 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 IFI30P13284 250 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 NR4A1P22736 598 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 LSP1P33241 339 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 THBS4P35443 961 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 GIPRP48546 466 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 ZNF84P51523 738 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 PIGFQ07326 219 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 TRAM2Q15035 370 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 TAF11Q15544 211 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 ANKDD1AQ495B1 522 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 FKBP9P1Q75LS8 142 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 CPLX4Q7Z7G2 160 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 SKA3Q8IX90 412 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 MCHR2Q969V1 340 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 FAM162AQ96A26 154 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 HSH2DQ96JZ2 352 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 SORCS2Q96PQ0 1159 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 FAM107BQ9H098 131 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 SMURF2Q9HAU4 748 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 MAN2C1Q9NTJ4 1040 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 RPS6KA6Q9UK32 745 aa12.5□□□□□ -0.41
DDX39A-208ENST00000588692 A0A096LNT2 108 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 GMNCA6NCL1 334 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 INAFM1C9JVW0 142 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 NDUFS8O00217 210 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 PIP5K1CO60331 668 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 ERCC1P07992 297 aaPredicted RBP12.49□□□□□ -0.41
DDX39A-208ENST00000588692 ZNF35P13682 527 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 ACADSP16219 412 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 DRD4P21917 467 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 PCSK6P29122 969 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 ZNF133P52736 654 aaPredicted RBP12.49□□□□□ -0.41
DDX39A-208ENST00000588692 PSME3P61289 254 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 RPS23P62266 143 aaKnown RBP12.49□□□□□ -0.41
DDX39A-208ENST00000588692 GALK2Q01415 458 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 LOXL1Q08397 574 aaPredicted RBP12.49□□□□□ -0.41
DDX39A-208ENST00000588692 SLC36A2Q495M3 483 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 ALG10Q5BKT4 473 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 C10orf128Q5T292 105 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 ARMC4Q5T2S8 1044 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 KRT80Q6KB66 452 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 CYP4Z1Q86W10 505 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 RNF113BQ8IZP6 322 aaKnown RBP12.49□□□□□ -0.41
DDX39A-208ENST00000588692 MOSPD2Q8NHP6 518 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 C10orf105Q8TEF2 133 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 ACOT11Q8WXI4 607 aaPredicted RBP12.49□□□□□ -0.41
DDX39A-208ENST00000588692 MS4A3Q96HJ5 214 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 RAB1BQ9H0U4 201 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 TXNIPQ9H3M7 391 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 C1orf198Q9H425 327 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 ANKRD19PQ9H560 264 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 SNX13Q9Y5W8 968 aa12.49□□□□□ -0.41
DDX39A-208ENST00000588692 ABCA1O95477 2261 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 hCG_2039718K7EN88 272 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 FFAR1O14842 300 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 TLX2O43763 284 aaPredicted RBP12.48□□□□□ -0.41
DDX39A-208ENST00000588692 CD5LO43866 347 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 TRMUO75648 421 aaKnown RBP12.48□□□□□ -0.41
DDX39A-208ENST00000588692 IGHMP01871 453 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 SERPINA5P05154 406 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 SAGP10523 405 aaPredicted RBP12.48□□□□□ -0.41
DDX39A-208ENST00000588692 YAP1P46937 504 aaKnown RBP12.48□□□□□ -0.41
DDX39A-208ENST00000588692 SLC9A3P48764 834 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 PDLIM4P50479 330 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 PRKCDQ05655 676 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 RUNX1T1Q06455 604 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 FAM205BPQ63HN1 556 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 NRMQ8IXM6 262 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 OR4K5Q8NGD3 323 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 FNDC8Q8TC99 324 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 ZNF347Q96SE7 839 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 VRK1Q99986 396 aaPredicted RBP12.48□□□□□ -0.41
DDX39A-208ENST00000588692 RHCGQ9UBD6 479 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 CMAHPQ9Y471 501 aa12.48□□□□□ -0.41
DDX39A-208ENST00000588692 J3KTA2 159 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 GMNNO75496 209 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 PRSS23O95084 383 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 GLRXP35754 106 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 EVX1P49640 407 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 MRPS34P82930 218 aaKnown RBP12.47□□□□□ -0.41
DDX39A-208ENST00000588692 RAB39AQ14964 217 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 LAPTM4AQ15012 233 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 TMEM53Q6P2H8 277 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 ZNF730Q6ZMV8 503 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 MBOAT2Q6ZWT7 520 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 SLC16A14Q7RTX9 510 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 CDK20Q8IZL9 346 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 SVOPLQ8N434 492 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 ANKS4BQ8N8V4 417 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 SYT14Q8NB59 555 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms