RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 KDM4DQ6B0I6 523 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 LRFN4Q6PJG9 635 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 DNM1P34Q6PK57 102 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 ZBTB49Q6ZSB9 765 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 IGFN1Q86VF2 1251 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 JAZF1Q86VZ6 243 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 HS3ST5Q8IZT8 346 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 SYT14Q8NB59 555 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 ICA1LQ8NDH6 482 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 NOXO1Q8NFA2 376 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 HDAC2Q92769 488 aaKnown RBP7.98□□□□□ -1.13
CIRBP-218ENST00000588344 MCHR2Q969V1 340 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 EME1Q96AY2 570 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 Q96M85 177 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 TSPAN32Q96QS1 320 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 MED18Q9BUE0 208 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 ACTR6Q9GZN1 396 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 EGLN3Q9H6Z9 239 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 USE1Q9NZ43 259 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 VSX1Q9NZR4 365 aaPredicted RBP7.98□□□□□ -1.13
CIRBP-218ENST00000588344 REV1Q9UBZ9 1251 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 PLEKHB1Q9UF11 243 aaPredicted RBP7.98□□□□□ -1.13
CIRBP-218ENST00000588344 IL20RAQ9UHF4 553 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 KLHL21Q9UJP4 597 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 AMDHD2Q9Y303 409 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 ADAM18Q9Y3Q7 739 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 TENM4Q6N022 2769 aa7.98□□□□□ -1.13
CIRBP-218ENST00000588344 PHF3Q92576 2039 aaKnown RBP7.97□□□□□ -1.13
CIRBP-218ENST00000588344 TEX13CA0A0J9YWL9 993 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 SLC22A23A1A5C7 686 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 A1L4Q6 167 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 SH3D21A4FU49 640 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 BHLHE40O14503 412 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 SOCS2O14508 198 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 LYZL6O75951 148 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 PPP1R3DO95685 299 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 WNT11O96014 354 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 ITGA5P08648 1049 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 OR8G3PP0DMU2 310 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 IGFBP5P24593 272 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 EDNRAP25101 427 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 POU1F1P28069 291 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 GRK5P34947 590 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 CENPAP49450 140 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 ALDH3A2P51648 485 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 BLVRAP53004 296 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 CRISP1P54107 249 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 PPP2R2BQ00005 443 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 CDK5Q00535 292 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 RUNX1T1Q06455 604 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 DAG1Q14118 895 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 GINS1Q14691 196 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 DAZAP2Q15038 168 aaPredicted RBP7.97□□□□□ -1.13
CIRBP-218ENST00000588344 RCN1Q15293 331 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 CEACAM16Q2WEN9 425 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 SLC36A3Q495N2 470 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 CLEC12AQ5QGZ9 265 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 KLHL24Q6TFL4 600 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 MEX3BQ6ZN04 569 aaKnown RBP7.97□□□□□ -1.13
CIRBP-218ENST00000588344 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.97□□□□□ -1.13
CIRBP-218ENST00000588344 FAM169BQ8N8A8 192 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 OR1K1Q8NGR3 316 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 NANOS1Q8WY41 292 aaKnown RBP7.97□□□□□ -1.13
CIRBP-218ENST00000588344 S100PBPQ96BU1 408 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 RDH12Q96NR8 316 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 WFIKKN1Q96NZ8 548 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 ALKBH3Q96Q83 286 aaPredicted RBP7.97□□□□□ -1.13
CIRBP-218ENST00000588344 SLC38A2Q96QD8 506 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 CIB1Q99828 191 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 FOXB1Q99853 325 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 KCNN2Q9H2S1 579 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 SIAEQ9HAT2 523 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 FBXL3Q9UKT7 428 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 COL12A1Q99715 3063 aa7.97□□□□□ -1.13
CIRBP-218ENST00000588344 MYO7BQ6PIF6 2116 aa7.96□□□□□ -1.13
CIRBP-218ENST00000588344 ARPC4-TTLL3A0A0A6YYG9 625 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 SAC3D1A6NKF1 404 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 RIIAD1A6NNX1 92 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 KHDRBS3O75525 346 aaKnown RBP7.96□□□□□ -1.14
CIRBP-218ENST00000588344 SOX14O95416 240 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 TP53P04637 393 aaPredicted RBP7.96□□□□□ -1.14
CIRBP-218ENST00000588344 ALPLP05186 524 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 HIST1H1CP16403 213 aaKnown RBP7.96□□□□□ -1.14
CIRBP-218ENST00000588344 ZNF3P17036 446 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 PAICSP22234 425 aaKnown RBP7.96□□□□□ -1.14
CIRBP-218ENST00000588344 GRNP28799 593 aaKnown RBP7.96□□□□□ -1.14
CIRBP-218ENST00000588344 CDKN2AP42771 156 aaKnown RBP7.96□□□□□ -1.14
CIRBP-218ENST00000588344 SLC25A1P53007 311 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 NR1H2P55055 460 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 MRPS34P82930 218 aaKnown RBP7.96□□□□□ -1.14
CIRBP-218ENST00000588344 ARF1P84077 181 aaKnown RBP7.96□□□□□ -1.14
CIRBP-218ENST00000588344 NPRL3Q12980 569 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 PPA1Q15181 289 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 PTGES3Q15185 160 aaKnown RBP7.96□□□□□ -1.14
CIRBP-218ENST00000588344 PGGHGQ32M88 737 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 C3orf36Q3SXR2 165 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 MESTQ5EB52 335 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 PHYHD1Q5SRE7 291 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 SLC35F1Q5T1Q4 408 aa7.96□□□□□ -1.14
CIRBP-218ENST00000588344 LEG1Q6P5S2 330 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms