RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 MRPL3P09001 348 aaKnown RBP10.03□□□□□ -0.8
VMP1-207ENST00000588131 C21orf33P30042 268 aaPredicted RBP10.03□□□□□ -0.8
VMP1-207ENST00000588131 PTGS2P35354 604 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 CLRN1P58418 232 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 LGALS3BPQ08380 585 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 ST3GAL4Q11206 333 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 SLC35D3Q5M8T2 416 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 ZNF585AQ6P3V2 769 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 ZNF773Q6PK81 442 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.03□□□□□ -0.8
VMP1-207ENST00000588131 ZBTB46Q86UZ6 589 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 STX19Q8N4C7 294 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 PROKR2Q8NFJ6 384 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 OR51G2Q8NGK0 314 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 OR6K6Q8NGW6 343 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 OR2T4Q8NH00 348 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 TMEM54Q969K7 222 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 FOXN4Q96NZ1 517 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 SPENQ96T58 3664 aaKnown RBP10.03□□□□□ -0.8
VMP1-207ENST00000588131 MRPS26Q9BYN8 205 aaKnown RBP10.03□□□□□ -0.8
VMP1-207ENST00000588131 CCDC90BQ9GZT6 254 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 ADGRL4Q9HBW9 690 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 KLHL9Q9P2J3 617 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 WARS2Q9UGM6 360 aaKnown RBP10.03□□□□□ -0.8
VMP1-207ENST00000588131 EXOGQ9Y2C4 368 aaKnown RBP10.03□□□□□ -0.8
VMP1-207ENST00000588131 FKBP7Q9Y680 259 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 MGAQ8IWI9 3026 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 A0A087WXM4 84 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 M0R3G1 203 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 EDNRAP25101 427 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 MAP2K4P45985 399 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 CSNK1A1P48729 337 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 RAB40BQ12829 278 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 TMED1Q13445 227 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 GGTLC2Q14390 218 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 RNPS1Q15287 305 aaKnown RBP10.02□□□□□ -0.81
VMP1-207ENST00000588131 HIST3H3Q16695 136 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 ACSF3Q4G176 576 aaPredicted RBP10.02□□□□□ -0.81
VMP1-207ENST00000588131 KLHL22Q53GT1 634 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 LCN1P1Q5VSP4 162 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 OTPQ5XKR4 325 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 RPTNQ6XPR3 784 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 AAED1Q7RTV5 226 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 HDDC2Q7Z4H3 204 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 P4HA3Q7Z4N8 544 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 TUSC5Q8IXB3 177 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 C20orf196Q8IYI0 205 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 SPARTQ8N0X7 666 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 SMAP2Q8WU79 429 aaPredicted RBP10.02□□□□□ -0.81
VMP1-207ENST00000588131 MYDGFQ969H8 173 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 TMEM45BQ96B21 275 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 TMEM80Q96HE8 168 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 RACGAP1Q9H0H5 632 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 RNF122Q9H9V4 155 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 CALHM2Q9HA72 323 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 BCO1Q9HAY6 547 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 FGF20Q9NP95 211 aaPredicted RBP10.02□□□□□ -0.81
VMP1-207ENST00000588131 CCNB1IP1Q9NPC3 277 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 HAO2Q9NYQ3 351 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 SCOCQ9UIL1 159 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 MOKQ9UQ07 419 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 RCE1Q9Y256 329 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 COA3Q9Y2R0 106 aaPredicted RBP10.02□□□□□ -0.81
VMP1-207ENST00000588131 COMMD3-BMI1R4GMX3 469 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 DNAJC13O75165 2243 aa10.02□□□□□ -0.81
VMP1-207ENST00000588131 TVP23AA6NH52 213 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 ZNF724A8MTY0 619 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 AHRRA9YTQ3 701 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 CENPBD1B2RD01 187 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 J3QRE1 110 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 GPR171O14626 319 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 AKAP8O43823 692 aaKnown RBP10.01□□□□□ -0.81
VMP1-207ENST00000588131 AHCYL1O43865 530 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 SELENOFO60613 162 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 KHDRBS3O75525 346 aaKnown RBP10.01□□□□□ -0.81
VMP1-207ENST00000588131 UPK3AO75631 287 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 RAB36O95755 333 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 FADS2O95864 444 aaKnown RBP10.01□□□□□ -0.81
VMP1-207ENST00000588131 TFP02787 698 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 TPOP07202 933 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 QDPRP09417 244 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 SBK2P0C263 348 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 SFTPCP11686 197 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 PSKH1P11801 424 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 CRABP1P29762 137 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 NAA10P41227 235 aaPredicted RBP10.01□□□□□ -0.81
VMP1-207ENST00000588131 CENPAP49450 140 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 IRF3Q14653 427 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 RTL6Q6ICC9 239 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 LRFN4Q6PJG9 635 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 SLC25A47Q6Q0C1 308 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 PRSS48Q7RTY5 328 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 NUFIP2Q7Z417 695 aaKnown RBP10.01□□□□□ -0.81
VMP1-207ENST00000588131 CD163Q86VB7 1156 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 MCEMP1Q8IX19 187 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 C9orf106Q8NAJ2 232 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 ZNF511Q8NB15 262 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 OR6N1Q8NGY5 312 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 FAM57AQ8TBR7 257 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 NSMAFQ92636 917 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms