RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 GTF3AQ92664 365 aaKnown RBP9.95□□□□□ -0.82
LIG3-207ENST00000586119 RDH5Q92781 318 aa9.95□□□□□ -0.82
LIG3-207ENST00000586119 FAHD2AQ96GK7 314 aa9.95□□□□□ -0.82
LIG3-207ENST00000586119 FOXB1Q99853 325 aa9.95□□□□□ -0.82
LIG3-207ENST00000586119 SH3GL3Q99963 347 aa9.95□□□□□ -0.82
LIG3-207ENST00000586119 ULBP2Q9BZM5 246 aa9.95□□□□□ -0.82
LIG3-207ENST00000586119 C12orf10Q9HB07 376 aa9.95□□□□□ -0.82
LIG3-207ENST00000586119 CACYBPQ9HB71 228 aaKnown RBP9.95□□□□□ -0.82
LIG3-207ENST00000586119 MOV10Q9HCE1 1003 aaKnown RBP9.95□□□□□ -0.82
LIG3-207ENST00000586119 VAPAQ9P0L0 249 aa9.95□□□□□ -0.82
LIG3-207ENST00000586119 TAGLN3Q9UI15 199 aa9.95□□□□□ -0.82
LIG3-207ENST00000586119 AP3M1Q9Y2T2 418 aa9.95□□□□□ -0.82
LIG3-207ENST00000586119 SPEF1Q9Y4P9 236 aa9.95□□□□□ -0.82
LIG3-207ENST00000586119 NOX1Q9Y5S8 564 aa9.95□□□□□ -0.82
LIG3-207ENST00000586119 LOC105371242A0A075B767 164 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 A0A0B4J2E0 115 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 A0A1B0GX12 115 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 ZNF726A6NNF4 738 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 EVPLLA8MZ36 301 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 MSMBP08118 114 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 ETS2P15036 469 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 BIDP55957 195 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 CDK6Q00534 326 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 MVKQ03426 396 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 FADDQ13158 208 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 RUNDC3AQ59EK9 446 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 GCNT6Q5T4J0 391 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 ULK3Q6PHR2 472 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 LRFN4Q6PJG9 635 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 DHRS4L2Q6PKH6 230 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 ZNF627Q7L945 461 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 TRPM8Q7Z2W7 1104 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 ARPINQ7Z6K5 226 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 FITM2Q8N6M3 262 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 C10orf53Q8N6V4 93 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 LRRC17Q8N6Y2 441 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 ADPRHL1Q8NDY3 354 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 DNAJA4Q8WW22 397 aaPredicted RBP9.94□□□□□ -0.82
LIG3-207ENST00000586119 SLC35B4Q969S0 331 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 LRRC58Q96CX6 371 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 SLC47A1Q96FL8 570 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 LRR1Q96L50 414 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 CGREF1Q99674 301 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 HOPXQ9BPY8 73 aaPredicted RBP9.94□□□□□ -0.82
LIG3-207ENST00000586119 ASPNQ9BXN1 380 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 MS4A5Q9H3V2 200 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 TAAR3PQ9P1P4 343 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 FBXO9Q9UK97 447 aaPredicted RBP9.94□□□□□ -0.82
LIG3-207ENST00000586119 CACNG2Q9Y698 323 aa9.94□□□□□ -0.82
LIG3-207ENST00000586119 A0A1W2PPW3 197 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 M0R3H8 397 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 SPRY1O43609 319 aaPredicted RBP9.93□□□□□ -0.82
LIG3-207ENST00000586119 AKAP8O43823 692 aaKnown RBP9.93□□□□□ -0.82
LIG3-207ENST00000586119 THY1P04216 161 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 GPX2P18283 190 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 ACHEP22303 614 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 CCL8P80075 99 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 PUDPQ08623 228 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 MELKQ14680 651 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 REEP3Q6NUK4 255 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 PEG10Q86TG7 708 aaKnown RBP9.93□□□□□ -0.82
LIG3-207ENST00000586119 TSPYL5Q86VY4 417 aaPredicted RBP9.93□□□□□ -0.82
LIG3-207ENST00000586119 RBM45Q8IUH3 476 aaKnown RBP9.93□□□□□ -0.82
LIG3-207ENST00000586119 POU5F2Q8N7G0 328 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 SMYD1Q8NB12 490 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 OR8J3Q8NGG0 315 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 OR4D11Q8NGI4 311 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 TMEM54Q969K7 222 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 RCN3Q96D15 328 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 CPPED1Q9BRF8 314 aaPredicted RBP9.93□□□□□ -0.82
LIG3-207ENST00000586119 TMEM27Q9HBJ8 222 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 NDE1Q9NXR1 346 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 MRPL39Q9NYK5 338 aaKnown RBP9.93□□□□□ -0.82
LIG3-207ENST00000586119 TAS2R5Q9NYW4 299 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 GLTPQ9NZD2 209 aa9.93□□□□□ -0.82
LIG3-207ENST00000586119 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.93□□□□□ -0.82
LIG3-207ENST00000586119 TMEM89A2RUT3 159 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 KCNAB3O43448 404 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 LYPD3O95274 346 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 RAB36O95755 333 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 CH25HO95992 272 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 SERPINA5P05154 406 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 ADORA3P0DMS8 318 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 ADRA2CP18825 462 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 CALB2P22676 271 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 CSNK1A1P48729 337 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 TMEM33P57088 247 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 RGS8P57771 180 aaPredicted RBP9.92□□□□□ -0.82
LIG3-207ENST00000586119 MYBPC1Q00872 1141 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 GALK2Q01415 458 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 GLO1Q04760 184 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 SCARB2Q14108 478 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 NPTX1Q15818 432 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 TMEM255AQ5JRV8 349 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 C5orf46Q6UWT4 87 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 LINC00114Q6XXX2 140 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 SLC35D2Q76EJ3 337 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 PXKQ7Z7A4 578 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 SLC22A24Q8N4F4 322 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 SCAIQ8N9R8 606 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms