RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 FAM46AQ96IP4 442 aaKnown RBP16.35■□□□□ 0.21
ATG4D-203ENST00000585752 DHRS1Q96LJ7 313 aa16.35■□□□□ 0.21
ATG4D-203ENST00000585752 REG4Q9BYZ8 158 aa16.35■□□□□ 0.21
ATG4D-203ENST00000585752 LINC00470Q9BZP3 86 aa16.35■□□□□ 0.21
ATG4D-203ENST00000585752 REEP1Q9H902 201 aa16.35■□□□□ 0.21
ATG4D-203ENST00000585752 B3GAT2Q9NPZ5 323 aa16.35■□□□□ 0.21
ATG4D-203ENST00000585752 B3GAT1Q9P2W7 334 aa16.35■□□□□ 0.21
ATG4D-203ENST00000585752 GDF2Q9UK05 429 aaPredicted RBP16.35■□□□□ 0.21
ATG4D-203ENST00000585752 TRBV4-1A0A0J9YWV2 114 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 VSTM5A8MXK1 200 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 HPRP00739 348 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 CD8AP01732 235 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 IGHV4-39P01824 125 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 CRYAAP02489 173 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 APOBEC3AP31941 199 aaPredicted RBP16.34■□□□□ 0.21
ATG4D-203ENST00000585752 ROR2Q01974 943 aaKnown RBP16.34■□□□□ 0.21
ATG4D-203ENST00000585752 RPL18Q07020 188 aaKnown RBP16.34■□□□□ 0.21
ATG4D-203ENST00000585752 TBRG1Q3YBR2 411 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 ANKDD1AQ495B1 522 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 CARD17Q5XLA6 110 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 SLC35D2Q76EJ3 337 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 OR4K5Q8NGD3 323 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 CANT1Q8WVQ1 401 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 LIPHQ8WWY8 451 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 INIPQ9NRY2 104 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 TAS2R5Q9NYW4 299 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.34■□□□□ 0.21
ATG4D-203ENST00000585752 NF1P21359 2839 aa16.34■□□□□ 0.21
ATG4D-203ENST00000585752 SH3PXD2BA1X283 911 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 TRAF3IP2O43734 574 aaPredicted RBP16.33■□□□□ 0.2
ATG4D-203ENST00000585752 UPK3AO75631 287 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 BCL10O95999 233 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 CST1P01037 141 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 HLA-DOBP13765 273 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 HOXB1P14653 301 aaPredicted RBP16.33■□□□□ 0.2
ATG4D-203ENST00000585752 IFNGR1P15260 489 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 MAKP20794 623 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 FUT4P22083 530 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 AQP2P41181 271 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 MAGEA2P43356 314 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 CAPZA2P47755 286 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 ERFP50548 548 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 DAP3P51398 398 aaKnown RBP16.33■□□□□ 0.2
ATG4D-203ENST00000585752 BIDP55957 195 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 DSCR9P59020 149 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 ALG10Q5BKT4 473 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 OR2T5Q6IEZ7 315 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 ANKRD16Q6P6B7 361 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 CLEC2AQ6UVW9 174 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 MEX3DQ86XN8 651 aaKnown RBP16.33■□□□□ 0.2
ATG4D-203ENST00000585752 ADGRG5Q8IZF4 528 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 LINC00471Q8N535 108 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 OR6N1Q8NGY5 312 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 OR2T29Q8NH02 315 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 OR51A7Q8NH64 312 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 EMC6Q9BV81 110 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 CHID1Q9BWS9 393 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 MED29Q9NX70 200 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 STX18Q9P2W9 335 aaKnown RBP16.33■□□□□ 0.2
ATG4D-203ENST00000585752 MOKQ9UQ07 419 aa16.33■□□□□ 0.2
ATG4D-203ENST00000585752 SAMHD1Q9Y3Z3 626 aaKnown RBP16.33■□□□□ 0.2
ATG4D-203ENST00000585752 TRAV27A0A087WT01 109 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 A0A096LPE4 126 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 A0A1W2PPZ6 126 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 SLC35F4A4IF30 521 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 INAFM1C9JVW0 142 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 ATP6V1G2-DDX39BF2Z307 99 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 F13BP05160 661 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 RPL4P36578 427 aaKnown RBP16.32■□□□□ 0.2
ATG4D-203ENST00000585752 LGALS3BPQ08380 585 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 CAMK2DQ13557 499 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 IQCCQ4KMZ1 466 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 TMPRSS11FQ6ZWK6 438 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 MAPK1IP1LQ8NDC0 245 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 OR13C2Q8NGS9 318 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 SLC38A2Q96QD8 506 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 OR2M2Q96R28 347 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 HIF3AQ9Y2N7 669 aa16.32■□□□□ 0.2
ATG4D-203ENST00000585752 TCRBV3S1A0A5B6 114 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 NDUFS7O75251 213 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 CCNB2O95067 398 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 CSNK1A1P48729 337 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 CLRN1P58418 232 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 LSM11P83369 360 aaKnown RBP eCLIP16.31■□□□□ 0.22e-15■□□□□ 8.5
ATG4D-203ENST00000585752 TOP3AQ13472 1001 aaPredicted RBP16.31■□□□□ 0.2
ATG4D-203ENST00000585752 MELKQ14680 651 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 LAPTM4AQ15012 233 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 SEC23BQ15437 767 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 ZBED5Q49AG3 693 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 ASRGL1Q7L266 308 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 MOSPD2Q8NHP6 518 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 BCL2L2Q92843 193 aaPredicted RBP16.31■□□□□ 0.2
ATG4D-203ENST00000585752 FBXO17Q96EF6 278 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 BOD1Q96IK1 185 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 TXNDC15Q96J42 360 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 RAB3IPQ96QF0 476 aaPredicted RBP16.31■□□□□ 0.2
ATG4D-203ENST00000585752 LYVE1Q9Y5Y7 322 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 CR1P17927 2039 aa16.31■□□□□ 0.2
ATG4D-203ENST00000585752 UNC119BA6NIH7 251 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 M0R3G1 203 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms